Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31538 | 94837;94838;94839 | chr2:178546816;178546815;178546814 | chr2:179411543;179411542;179411541 |
N2AB | 29897 | 89914;89915;89916 | chr2:178546816;178546815;178546814 | chr2:179411543;179411542;179411541 |
N2A | 28970 | 87133;87134;87135 | chr2:178546816;178546815;178546814 | chr2:179411543;179411542;179411541 |
N2B | 22473 | 67642;67643;67644 | chr2:178546816;178546815;178546814 | chr2:179411543;179411542;179411541 |
Novex-1 | 22598 | 68017;68018;68019 | chr2:178546816;178546815;178546814 | chr2:179411543;179411542;179411541 |
Novex-2 | 22665 | 68218;68219;68220 | chr2:178546816;178546815;178546814 | chr2:179411543;179411542;179411541 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1389165052 | None | None | N | 0.252 | 0.076 | 0.212008924253 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1389165052 | None | None | N | 0.252 | 0.076 | 0.212008924253 | gnomAD-4.0.0 | 1.24083E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.48692E-07 | 0 | 1.60426E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8103 | likely_pathogenic | 0.7793 | pathogenic | -1.628 | Destabilizing | 0.296 | N | 0.662 | neutral | N | 0.499832295 | None | None | I |
V/C | 0.954 | likely_pathogenic | 0.9503 | pathogenic | -1.109 | Destabilizing | 0.991 | D | 0.767 | deleterious | None | None | None | None | I |
V/D | 0.984 | likely_pathogenic | 0.9872 | pathogenic | -1.589 | Destabilizing | 0.879 | D | 0.849 | deleterious | N | 0.481132155 | None | None | I |
V/E | 0.962 | likely_pathogenic | 0.9659 | pathogenic | -1.576 | Destabilizing | 0.906 | D | 0.823 | deleterious | None | None | None | None | I |
V/F | 0.8098 | likely_pathogenic | 0.8384 | pathogenic | -1.25 | Destabilizing | 0.782 | D | 0.831 | deleterious | N | 0.489410587 | None | None | I |
V/G | 0.8933 | likely_pathogenic | 0.8986 | pathogenic | -1.968 | Destabilizing | 0.879 | D | 0.833 | deleterious | N | 0.507594202 | None | None | I |
V/H | 0.9877 | likely_pathogenic | 0.9896 | pathogenic | -1.493 | Destabilizing | 0.991 | D | 0.819 | deleterious | None | None | None | None | I |
V/I | 0.0706 | likely_benign | 0.0708 | benign | -0.785 | Destabilizing | None | N | 0.252 | neutral | N | 0.365325472 | None | None | I |
V/K | 0.9779 | likely_pathogenic | 0.9782 | pathogenic | -1.419 | Destabilizing | 0.906 | D | 0.823 | deleterious | None | None | None | None | I |
V/L | 0.3627 | ambiguous | 0.3674 | ambiguous | -0.785 | Destabilizing | 0.031 | N | 0.497 | neutral | N | 0.454584826 | None | None | I |
V/M | 0.5207 | ambiguous | 0.5214 | ambiguous | -0.552 | Destabilizing | 0.826 | D | 0.691 | prob.neutral | None | None | None | None | I |
V/N | 0.9137 | likely_pathogenic | 0.9291 | pathogenic | -1.248 | Destabilizing | 0.967 | D | 0.85 | deleterious | None | None | None | None | I |
V/P | 0.8504 | likely_pathogenic | 0.8242 | pathogenic | -1.031 | Destabilizing | 0.967 | D | 0.805 | deleterious | None | None | None | None | I |
V/Q | 0.9673 | likely_pathogenic | 0.9681 | pathogenic | -1.41 | Destabilizing | 0.967 | D | 0.802 | deleterious | None | None | None | None | I |
V/R | 0.9647 | likely_pathogenic | 0.9653 | pathogenic | -0.862 | Destabilizing | 0.906 | D | 0.851 | deleterious | None | None | None | None | I |
V/S | 0.9151 | likely_pathogenic | 0.911 | pathogenic | -1.778 | Destabilizing | 0.906 | D | 0.809 | deleterious | None | None | None | None | I |
V/T | 0.749 | likely_pathogenic | 0.7287 | pathogenic | -1.654 | Destabilizing | 0.575 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/W | 0.9906 | likely_pathogenic | 0.9927 | pathogenic | -1.468 | Destabilizing | 0.991 | D | 0.81 | deleterious | None | None | None | None | I |
V/Y | 0.9705 | likely_pathogenic | 0.9739 | pathogenic | -1.182 | Destabilizing | 0.906 | D | 0.817 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.