Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3154 | 9685;9686;9687 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
N2AB | 3154 | 9685;9686;9687 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
N2A | 3154 | 9685;9686;9687 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
N2B | 3108 | 9547;9548;9549 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
Novex-1 | 3108 | 9547;9548;9549 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
Novex-2 | 3108 | 9547;9548;9549 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
Novex-3 | 3154 | 9685;9686;9687 | chr2:178767770;178767769;178767768 | chr2:179632497;179632496;179632495 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.497 | D | 0.547 | 0.324 | 0.32053947749 | gnomAD-4.0.0 | 6.84118E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99308E-07 | 0 | 0 |
K/R | rs4893853 | 0.051 | None | N | 0.157 | 0.064 | None | gnomAD-2.1.1 | 6.74519E-02 | None | None | None | None | N | None | 7.07989E-02 | 1.84945E-01 | None | 2.91675E-02 | 2.5439E-02 | None | 1.69171E-01 | None | 5.49301E-02 | 2.30732E-02 | 5.40915E-02 |
K/R | rs4893853 | 0.051 | None | N | 0.157 | 0.064 | None | gnomAD-3.1.2 | 5.35297E-02 | None | None | None | None | N | None | 7.00502E-02 | 1.34834E-01 | 0 | 2.59217E-02 | 2.17224E-02 | None | 5.70109E-02 | 2.8481E-02 | 2.21373E-02 | 1.61765E-01 | 3.77629E-02 |
K/R | rs4893853 | 0.051 | None | N | 0.157 | 0.064 | None | 1000 genomes | 8.60623E-02 | None | None | None | None | N | None | 7.49E-02 | 1.542E-01 | None | None | 2.08E-02 | 3.48E-02 | None | None | None | 1.728E-01 | None |
K/R | rs4893853 | 0.051 | None | N | 0.157 | 0.064 | None | gnomAD-4.0.0 | 3.99737E-02 | None | None | None | None | N | None | 6.94148E-02 | 1.70266E-01 | None | 2.77646E-02 | 1.35237E-02 | None | 5.6435E-02 | 4.60396E-02 | 2.2374E-02 | 1.61495E-01 | 4.26213E-02 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.584 | likely_pathogenic | 0.5944 | pathogenic | 0.036 | Stabilizing | 0.272 | N | 0.536 | neutral | None | None | None | None | N |
K/C | 0.901 | likely_pathogenic | 0.8832 | pathogenic | -0.307 | Destabilizing | 0.968 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/D | 0.6275 | likely_pathogenic | 0.6195 | pathogenic | 0.112 | Stabilizing | 0.567 | D | 0.573 | neutral | None | None | None | None | N |
K/E | 0.2537 | likely_benign | 0.2841 | benign | 0.106 | Stabilizing | 0.124 | N | 0.542 | neutral | N | 0.517655193 | None | None | N |
K/F | 0.9518 | likely_pathogenic | 0.9584 | pathogenic | -0.249 | Destabilizing | 0.726 | D | 0.667 | neutral | None | None | None | None | N |
K/G | 0.5377 | ambiguous | 0.4964 | ambiguous | -0.129 | Destabilizing | 0.272 | N | 0.54 | neutral | None | None | None | None | N |
K/H | 0.46 | ambiguous | 0.4523 | ambiguous | -0.357 | Destabilizing | 0.726 | D | 0.618 | neutral | None | None | None | None | N |
K/I | 0.7913 | likely_pathogenic | 0.8153 | pathogenic | 0.384 | Stabilizing | 0.726 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/L | 0.7104 | likely_pathogenic | 0.7136 | pathogenic | 0.384 | Stabilizing | 0.272 | N | 0.54 | neutral | None | None | None | None | N |
K/M | 0.5773 | likely_pathogenic | 0.6149 | pathogenic | 0.158 | Stabilizing | 0.958 | D | 0.614 | neutral | D | 0.609759749 | None | None | N |
K/N | 0.5024 | ambiguous | 0.4936 | ambiguous | 0.202 | Stabilizing | 0.497 | N | 0.547 | neutral | D | 0.607522446 | None | None | N |
K/P | 0.7355 | likely_pathogenic | 0.6439 | pathogenic | 0.295 | Stabilizing | 0.726 | D | 0.624 | neutral | None | None | None | None | N |
K/Q | 0.1932 | likely_benign | 0.2022 | benign | 0.024 | Stabilizing | 0.331 | N | 0.581 | neutral | N | 0.514443588 | None | None | N |
K/R | 0.0797 | likely_benign | 0.0749 | benign | -0.003 | Destabilizing | None | N | 0.157 | neutral | N | 0.50063072 | None | None | N |
K/S | 0.5774 | likely_pathogenic | 0.5776 | pathogenic | -0.28 | Destabilizing | 0.272 | N | 0.509 | neutral | None | None | None | None | N |
K/T | 0.3583 | ambiguous | 0.3988 | ambiguous | -0.148 | Destabilizing | 0.22 | N | 0.574 | neutral | D | 0.541227067 | None | None | N |
K/V | 0.7198 | likely_pathogenic | 0.7429 | pathogenic | 0.295 | Stabilizing | 0.567 | D | 0.574 | neutral | None | None | None | None | N |
K/W | 0.8576 | likely_pathogenic | 0.8622 | pathogenic | -0.278 | Destabilizing | 0.968 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Y | 0.8393 | likely_pathogenic | 0.8461 | pathogenic | 0.088 | Stabilizing | 0.726 | D | 0.665 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.