Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3155 | 9688;9689;9690 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
N2AB | 3155 | 9688;9689;9690 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
N2A | 3155 | 9688;9689;9690 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
N2B | 3109 | 9550;9551;9552 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
Novex-1 | 3109 | 9550;9551;9552 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
Novex-2 | 3109 | 9550;9551;9552 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
Novex-3 | 3155 | 9688;9689;9690 | chr2:178767767;178767766;178767765 | chr2:179632494;179632493;179632492 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs1458652114 | None | 0.016 | N | 0.237 | 0.084 | 0.257292322809 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs1458652114 | None | 0.016 | N | 0.237 | 0.084 | 0.257292322809 | gnomAD-4.0.0 | 2.02981E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2367 | likely_benign | 0.2585 | benign | -0.717 | Destabilizing | 0.201 | N | 0.244 | neutral | N | 0.502194723 | None | None | I |
E/C | 0.9501 | likely_pathogenic | 0.9629 | pathogenic | -0.506 | Destabilizing | 0.992 | D | 0.393 | neutral | None | None | None | None | I |
E/D | 0.1284 | likely_benign | 0.139 | benign | -0.691 | Destabilizing | 0.004 | N | 0.084 | neutral | N | 0.382675332 | None | None | I |
E/F | 0.8659 | likely_pathogenic | 0.9096 | pathogenic | -0.035 | Destabilizing | 0.92 | D | 0.389 | neutral | None | None | None | None | I |
E/G | 0.3541 | ambiguous | 0.3898 | ambiguous | -1.035 | Destabilizing | 0.201 | N | 0.294 | neutral | N | 0.511817793 | None | None | I |
E/H | 0.6648 | likely_pathogenic | 0.7298 | pathogenic | 0.037 | Stabilizing | 0.92 | D | 0.364 | neutral | None | None | None | None | I |
E/I | 0.55 | ambiguous | 0.6033 | pathogenic | 0.139 | Stabilizing | 0.92 | D | 0.398 | neutral | None | None | None | None | I |
E/K | 0.4076 | ambiguous | 0.428 | ambiguous | -0.291 | Destabilizing | 0.201 | N | 0.307 | neutral | N | 0.496207717 | None | None | I |
E/L | 0.6853 | likely_pathogenic | 0.7387 | pathogenic | 0.139 | Stabilizing | 0.617 | D | 0.393 | neutral | None | None | None | None | I |
E/M | 0.6362 | likely_pathogenic | 0.6954 | pathogenic | 0.279 | Stabilizing | 0.992 | D | 0.352 | neutral | None | None | None | None | I |
E/N | 0.3135 | likely_benign | 0.3341 | benign | -0.862 | Destabilizing | 0.021 | N | 0.236 | neutral | None | None | None | None | I |
E/P | 0.8769 | likely_pathogenic | 0.8487 | pathogenic | -0.126 | Destabilizing | 0.92 | D | 0.361 | neutral | None | None | None | None | I |
E/Q | 0.2859 | likely_benign | 0.3051 | benign | -0.736 | Destabilizing | 0.016 | N | 0.237 | neutral | N | 0.497479576 | None | None | I |
E/R | 0.5762 | likely_pathogenic | 0.604 | pathogenic | 0.124 | Stabilizing | 0.447 | N | 0.34 | neutral | None | None | None | None | I |
E/S | 0.297 | likely_benign | 0.334 | benign | -1.097 | Destabilizing | 0.021 | N | 0.132 | neutral | None | None | None | None | I |
E/T | 0.2964 | likely_benign | 0.3238 | benign | -0.826 | Destabilizing | 0.447 | N | 0.281 | neutral | None | None | None | None | I |
E/V | 0.318 | likely_benign | 0.3579 | ambiguous | -0.126 | Destabilizing | 0.549 | D | 0.374 | neutral | N | 0.503721528 | None | None | I |
E/W | 0.9527 | likely_pathogenic | 0.9692 | pathogenic | 0.281 | Stabilizing | 0.992 | D | 0.51 | neutral | None | None | None | None | I |
E/Y | 0.7772 | likely_pathogenic | 0.8343 | pathogenic | 0.231 | Stabilizing | 0.972 | D | 0.382 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.