Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31554 | 94885;94886;94887 | chr2:178546768;178546767;178546766 | chr2:179411495;179411494;179411493 |
N2AB | 29913 | 89962;89963;89964 | chr2:178546768;178546767;178546766 | chr2:179411495;179411494;179411493 |
N2A | 28986 | 87181;87182;87183 | chr2:178546768;178546767;178546766 | chr2:179411495;179411494;179411493 |
N2B | 22489 | 67690;67691;67692 | chr2:178546768;178546767;178546766 | chr2:179411495;179411494;179411493 |
Novex-1 | 22614 | 68065;68066;68067 | chr2:178546768;178546767;178546766 | chr2:179411495;179411494;179411493 |
Novex-2 | 22681 | 68266;68267;68268 | chr2:178546768;178546767;178546766 | chr2:179411495;179411494;179411493 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 0.956 | N | 0.542 | 0.316 | 0.286465849087 | gnomAD-4.0.0 | 4.78953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29642E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2125 | likely_benign | 0.1669 | benign | -0.448 | Destabilizing | 0.37 | N | 0.333 | neutral | N | 0.474947772 | None | None | N |
G/C | 0.3053 | likely_benign | 0.2292 | benign | -0.821 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.545433144 | None | None | N |
G/D | 0.4131 | ambiguous | 0.3189 | benign | -0.498 | Destabilizing | 0.956 | D | 0.58 | neutral | N | 0.511313261 | None | None | N |
G/E | 0.4117 | ambiguous | 0.3076 | benign | -0.636 | Destabilizing | 0.995 | D | 0.596 | neutral | None | None | None | None | N |
G/F | 0.7395 | likely_pathogenic | 0.6384 | pathogenic | -1.068 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/H | 0.564 | ambiguous | 0.4635 | ambiguous | -0.852 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
G/I | 0.4669 | ambiguous | 0.3438 | ambiguous | -0.45 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/K | 0.6198 | likely_pathogenic | 0.5003 | ambiguous | -0.928 | Destabilizing | 0.995 | D | 0.603 | neutral | None | None | None | None | N |
G/L | 0.6008 | likely_pathogenic | 0.4841 | ambiguous | -0.45 | Destabilizing | 0.995 | D | 0.684 | prob.neutral | None | None | None | None | N |
G/M | 0.614 | likely_pathogenic | 0.5146 | ambiguous | -0.517 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
G/N | 0.3517 | ambiguous | 0.2921 | benign | -0.504 | Destabilizing | 0.437 | N | 0.305 | neutral | None | None | None | None | N |
G/P | 0.839 | likely_pathogenic | 0.7313 | pathogenic | -0.414 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
G/Q | 0.4696 | ambiguous | 0.3809 | ambiguous | -0.743 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
G/R | 0.4617 | ambiguous | 0.3666 | ambiguous | -0.562 | Destabilizing | 0.997 | D | 0.681 | prob.neutral | N | 0.497677291 | None | None | N |
G/S | 0.1165 | likely_benign | 0.1012 | benign | -0.679 | Destabilizing | 0.956 | D | 0.542 | neutral | N | 0.519177809 | None | None | N |
G/T | 0.2315 | likely_benign | 0.181 | benign | -0.74 | Destabilizing | 0.995 | D | 0.602 | neutral | None | None | None | None | N |
G/V | 0.3342 | likely_benign | 0.24 | benign | -0.414 | Destabilizing | 0.994 | D | 0.702 | prob.neutral | N | 0.498918285 | None | None | N |
G/W | 0.5964 | likely_pathogenic | 0.4763 | ambiguous | -1.268 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
G/Y | 0.6134 | likely_pathogenic | 0.4951 | ambiguous | -0.906 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.