Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31560 | 94903;94904;94905 | chr2:178546750;178546749;178546748 | chr2:179411477;179411476;179411475 |
N2AB | 29919 | 89980;89981;89982 | chr2:178546750;178546749;178546748 | chr2:179411477;179411476;179411475 |
N2A | 28992 | 87199;87200;87201 | chr2:178546750;178546749;178546748 | chr2:179411477;179411476;179411475 |
N2B | 22495 | 67708;67709;67710 | chr2:178546750;178546749;178546748 | chr2:179411477;179411476;179411475 |
Novex-1 | 22620 | 68083;68084;68085 | chr2:178546750;178546749;178546748 | chr2:179411477;179411476;179411475 |
Novex-2 | 22687 | 68284;68285;68286 | chr2:178546750;178546749;178546748 | chr2:179411477;179411476;179411475 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.999 | N | 0.608 | 0.418 | 0.202086224978 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85842E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9633 | likely_pathogenic | 0.9623 | pathogenic | -1.074 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
N/C | 0.8662 | likely_pathogenic | 0.8829 | pathogenic | -0.101 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
N/D | 0.9652 | likely_pathogenic | 0.9428 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.481852944 | None | None | N |
N/E | 0.9979 | likely_pathogenic | 0.997 | pathogenic | -0.163 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/F | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -0.703 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
N/G | 0.9469 | likely_pathogenic | 0.9368 | pathogenic | -1.463 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
N/H | 0.917 | likely_pathogenic | 0.8773 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.486043226 | None | None | N |
N/I | 0.9872 | likely_pathogenic | 0.9825 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.495335616 | None | None | N |
N/K | 0.9991 | likely_pathogenic | 0.9985 | pathogenic | 0.14 | Stabilizing | 1.0 | D | 0.74 | deleterious | N | 0.489927112 | None | None | N |
N/L | 0.9823 | likely_pathogenic | 0.9772 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
N/M | 0.991 | likely_pathogenic | 0.9887 | pathogenic | 0.208 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/P | 0.9891 | likely_pathogenic | 0.9851 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
N/Q | 0.994 | likely_pathogenic | 0.9912 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
N/R | 0.9974 | likely_pathogenic | 0.9961 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
N/S | 0.2295 | likely_benign | 0.2195 | benign | -0.856 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.493353858 | None | None | N |
N/T | 0.7488 | likely_pathogenic | 0.728 | pathogenic | -0.441 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.476066046 | None | None | N |
N/V | 0.9788 | likely_pathogenic | 0.9756 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/W | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -0.386 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
N/Y | 0.989 | likely_pathogenic | 0.9835 | pathogenic | -0.139 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.49471696 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.