Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31562 | 94909;94910;94911 | chr2:178546744;178546743;178546742 | chr2:179411471;179411470;179411469 |
N2AB | 29921 | 89986;89987;89988 | chr2:178546744;178546743;178546742 | chr2:179411471;179411470;179411469 |
N2A | 28994 | 87205;87206;87207 | chr2:178546744;178546743;178546742 | chr2:179411471;179411470;179411469 |
N2B | 22497 | 67714;67715;67716 | chr2:178546744;178546743;178546742 | chr2:179411471;179411470;179411469 |
Novex-1 | 22622 | 68089;68090;68091 | chr2:178546744;178546743;178546742 | chr2:179411471;179411470;179411469 |
Novex-2 | 22689 | 68290;68291;68292 | chr2:178546744;178546743;178546742 | chr2:179411471;179411470;179411469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.981 | N | 0.609 | 0.357 | 0.317958651998 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
T/N | rs1697337398 | None | 0.999 | N | 0.65 | 0.384 | 0.551798466036 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs1697337398 | None | 0.999 | N | 0.65 | 0.384 | 0.551798466036 | gnomAD-4.0.0 | 6.57592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47063E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2387 | likely_benign | 0.1817 | benign | -0.158 | Destabilizing | 0.981 | D | 0.609 | neutral | N | 0.503106705 | None | None | I |
T/C | 0.8677 | likely_pathogenic | 0.8209 | pathogenic | -0.413 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | I |
T/D | 0.9096 | likely_pathogenic | 0.8482 | pathogenic | 0.212 | Stabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
T/E | 0.8992 | likely_pathogenic | 0.8442 | pathogenic | 0.132 | Stabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | I |
T/F | 0.8964 | likely_pathogenic | 0.8517 | pathogenic | -0.799 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/G | 0.5323 | ambiguous | 0.445 | ambiguous | -0.233 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | I |
T/H | 0.7946 | likely_pathogenic | 0.706 | pathogenic | -0.382 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
T/I | 0.7817 | likely_pathogenic | 0.7121 | pathogenic | -0.087 | Destabilizing | 0.999 | D | 0.64 | neutral | N | 0.485347663 | None | None | I |
T/K | 0.8416 | likely_pathogenic | 0.7613 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
T/L | 0.4912 | ambiguous | 0.3839 | ambiguous | -0.087 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | I |
T/M | 0.328 | likely_benign | 0.2635 | benign | -0.208 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | I |
T/N | 0.4138 | ambiguous | 0.2994 | benign | -0.136 | Destabilizing | 0.999 | D | 0.65 | neutral | N | 0.46930487 | None | None | I |
T/P | 0.8298 | likely_pathogenic | 0.7376 | pathogenic | -0.085 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.484624421 | None | None | I |
T/Q | 0.691 | likely_pathogenic | 0.6034 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
T/R | 0.7838 | likely_pathogenic | 0.7043 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | I |
T/S | 0.2831 | likely_benign | 0.2121 | benign | -0.304 | Destabilizing | 0.905 | D | 0.427 | neutral | N | 0.467185977 | None | None | I |
T/V | 0.5538 | ambiguous | 0.4852 | ambiguous | -0.085 | Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | I |
T/W | 0.9783 | likely_pathogenic | 0.9674 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
T/Y | 0.8958 | likely_pathogenic | 0.8488 | pathogenic | -0.565 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.