Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31563 | 94912;94913;94914 | chr2:178546741;178546740;178546739 | chr2:179411468;179411467;179411466 |
N2AB | 29922 | 89989;89990;89991 | chr2:178546741;178546740;178546739 | chr2:179411468;179411467;179411466 |
N2A | 28995 | 87208;87209;87210 | chr2:178546741;178546740;178546739 | chr2:179411468;179411467;179411466 |
N2B | 22498 | 67717;67718;67719 | chr2:178546741;178546740;178546739 | chr2:179411468;179411467;179411466 |
Novex-1 | 22623 | 68092;68093;68094 | chr2:178546741;178546740;178546739 | chr2:179411468;179411467;179411466 |
Novex-2 | 22690 | 68293;68294;68295 | chr2:178546741;178546740;178546739 | chr2:179411468;179411467;179411466 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.007 | N | 0.182 | 0.167 | 0.482209950775 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
I/V | None | None | 0.267 | N | 0.189 | 0.168 | 0.580770577012 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3317 | likely_benign | 0.249 | benign | -1.121 | Destabilizing | 0.525 | D | 0.384 | neutral | None | None | None | None | I |
I/C | 0.8327 | likely_pathogenic | 0.7804 | pathogenic | -0.864 | Destabilizing | 0.998 | D | 0.353 | neutral | None | None | None | None | I |
I/D | 0.87 | likely_pathogenic | 0.7557 | pathogenic | -0.336 | Destabilizing | 0.728 | D | 0.365 | neutral | None | None | None | None | I |
I/E | 0.8457 | likely_pathogenic | 0.7499 | pathogenic | -0.371 | Destabilizing | 0.842 | D | 0.359 | neutral | None | None | None | None | I |
I/F | 0.367 | ambiguous | 0.279 | benign | -0.79 | Destabilizing | 0.966 | D | 0.4 | neutral | N | 0.454046108 | None | None | I |
I/G | 0.7582 | likely_pathogenic | 0.6548 | pathogenic | -1.381 | Destabilizing | 0.842 | D | 0.353 | neutral | None | None | None | None | I |
I/H | 0.7833 | likely_pathogenic | 0.6505 | pathogenic | -0.6 | Destabilizing | 0.974 | D | 0.375 | neutral | None | None | None | None | I |
I/K | 0.8099 | likely_pathogenic | 0.6999 | pathogenic | -0.72 | Destabilizing | 0.842 | D | 0.369 | neutral | None | None | None | None | I |
I/L | 0.1332 | likely_benign | 0.1213 | benign | -0.521 | Destabilizing | 0.267 | N | 0.177 | neutral | N | 0.387341113 | None | None | I |
I/M | 0.1149 | likely_benign | 0.0998 | benign | -0.509 | Destabilizing | 0.989 | D | 0.402 | neutral | N | 0.435633706 | None | None | I |
I/N | 0.3249 | likely_benign | 0.21 | benign | -0.547 | Destabilizing | 0.051 | N | 0.383 | neutral | N | 0.304914518 | None | None | I |
I/P | 0.6443 | likely_pathogenic | 0.5378 | ambiguous | -0.687 | Destabilizing | 0.974 | D | 0.409 | neutral | None | None | None | None | I |
I/Q | 0.7451 | likely_pathogenic | 0.6222 | pathogenic | -0.722 | Destabilizing | 0.974 | D | 0.43 | neutral | None | None | None | None | I |
I/R | 0.7367 | likely_pathogenic | 0.6187 | pathogenic | -0.179 | Destabilizing | 0.974 | D | 0.409 | neutral | None | None | None | None | I |
I/S | 0.3787 | ambiguous | 0.264 | benign | -1.133 | Destabilizing | 0.454 | N | 0.308 | neutral | N | 0.394072298 | None | None | I |
I/T | 0.2399 | likely_benign | 0.1617 | benign | -1.05 | Destabilizing | 0.007 | N | 0.182 | neutral | N | 0.360959802 | None | None | I |
I/V | 0.0725 | likely_benign | 0.0683 | benign | -0.687 | Destabilizing | 0.267 | N | 0.189 | neutral | N | 0.40467608 | None | None | I |
I/W | 0.9067 | likely_pathogenic | 0.8698 | pathogenic | -0.813 | Destabilizing | 0.998 | D | 0.437 | neutral | None | None | None | None | I |
I/Y | 0.723 | likely_pathogenic | 0.6236 | pathogenic | -0.584 | Destabilizing | 0.991 | D | 0.405 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.