Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31569 | 94930;94931;94932 | chr2:178546723;178546722;178546721 | chr2:179411450;179411449;179411448 |
N2AB | 29928 | 90007;90008;90009 | chr2:178546723;178546722;178546721 | chr2:179411450;179411449;179411448 |
N2A | 29001 | 87226;87227;87228 | chr2:178546723;178546722;178546721 | chr2:179411450;179411449;179411448 |
N2B | 22504 | 67735;67736;67737 | chr2:178546723;178546722;178546721 | chr2:179411450;179411449;179411448 |
Novex-1 | 22629 | 68110;68111;68112 | chr2:178546723;178546722;178546721 | chr2:179411450;179411449;179411448 |
Novex-2 | 22696 | 68311;68312;68313 | chr2:178546723;178546722;178546721 | chr2:179411450;179411449;179411448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.999 | N | 0.589 | 0.455 | 0.36036328697 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9916 | likely_pathogenic | 0.9854 | pathogenic | -2.004 | Highly Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
F/C | 0.9094 | likely_pathogenic | 0.8667 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.799 | deleterious | N | 0.519289665 | None | None | I |
F/D | 0.9986 | likely_pathogenic | 0.9975 | pathogenic | -1.955 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
F/E | 0.9987 | likely_pathogenic | 0.9978 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
F/G | 0.9956 | likely_pathogenic | 0.9933 | pathogenic | -2.418 | Highly Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
F/H | 0.9394 | likely_pathogenic | 0.9191 | pathogenic | -0.887 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
F/I | 0.9651 | likely_pathogenic | 0.9394 | pathogenic | -0.69 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.476724382 | None | None | I |
F/K | 0.9982 | likely_pathogenic | 0.9971 | pathogenic | -1.564 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
F/L | 0.9944 | likely_pathogenic | 0.9902 | pathogenic | -0.69 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.509667317 | None | None | I |
F/M | 0.981 | likely_pathogenic | 0.9674 | pathogenic | -0.442 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | I |
F/N | 0.994 | likely_pathogenic | 0.9901 | pathogenic | -2.046 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
F/P | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
F/Q | 0.9941 | likely_pathogenic | 0.9906 | pathogenic | -1.923 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
F/R | 0.9926 | likely_pathogenic | 0.9892 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
F/S | 0.9856 | likely_pathogenic | 0.976 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.533305326 | None | None | I |
F/T | 0.9945 | likely_pathogenic | 0.9901 | pathogenic | -2.383 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
F/V | 0.9495 | likely_pathogenic | 0.9158 | pathogenic | -1.132 | Destabilizing | 1.0 | D | 0.654 | neutral | N | 0.465222584 | None | None | I |
F/W | 0.8912 | likely_pathogenic | 0.8683 | pathogenic | 0.155 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
F/Y | 0.2558 | likely_benign | 0.2285 | benign | -0.143 | Destabilizing | 0.999 | D | 0.5 | neutral | N | 0.440959381 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.