Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31578 | 94957;94958;94959 | chr2:178546696;178546695;178546694 | chr2:179411423;179411422;179411421 |
N2AB | 29937 | 90034;90035;90036 | chr2:178546696;178546695;178546694 | chr2:179411423;179411422;179411421 |
N2A | 29010 | 87253;87254;87255 | chr2:178546696;178546695;178546694 | chr2:179411423;179411422;179411421 |
N2B | 22513 | 67762;67763;67764 | chr2:178546696;178546695;178546694 | chr2:179411423;179411422;179411421 |
Novex-1 | 22638 | 68137;68138;68139 | chr2:178546696;178546695;178546694 | chr2:179411423;179411422;179411421 |
Novex-2 | 22705 | 68338;68339;68340 | chr2:178546696;178546695;178546694 | chr2:179411423;179411422;179411421 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs2154146101 | None | 0.004 | N | 0.093 | 0.131 | 0.0846915920261 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2002 | likely_benign | 0.2104 | benign | -0.609 | Destabilizing | 0.896 | D | 0.514 | neutral | N | 0.375025177 | None | None | N |
D/C | 0.694 | likely_pathogenic | 0.6828 | pathogenic | -0.076 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/E | 0.1592 | likely_benign | 0.145 | benign | -0.534 | Destabilizing | 0.004 | N | 0.093 | neutral | N | 0.366752411 | None | None | N |
D/F | 0.7175 | likely_pathogenic | 0.7022 | pathogenic | -0.444 | Destabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | N |
D/G | 0.2465 | likely_benign | 0.2604 | benign | -0.875 | Destabilizing | 0.896 | D | 0.491 | neutral | N | 0.386994397 | None | None | N |
D/H | 0.4096 | ambiguous | 0.4143 | ambiguous | -0.582 | Destabilizing | 0.984 | D | 0.547 | neutral | N | 0.393824369 | None | None | N |
D/I | 0.5543 | ambiguous | 0.5142 | ambiguous | 0.068 | Stabilizing | 0.988 | D | 0.648 | neutral | None | None | None | None | N |
D/K | 0.5227 | ambiguous | 0.509 | ambiguous | -0.038 | Destabilizing | 0.851 | D | 0.476 | neutral | None | None | None | None | N |
D/L | 0.5277 | ambiguous | 0.5315 | ambiguous | 0.068 | Stabilizing | 0.976 | D | 0.597 | neutral | None | None | None | None | N |
D/M | 0.6568 | likely_pathogenic | 0.6252 | pathogenic | 0.485 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
D/N | 0.1243 | likely_benign | 0.1237 | benign | -0.426 | Destabilizing | 0.896 | D | 0.504 | neutral | N | 0.395363164 | None | None | N |
D/P | 0.9739 | likely_pathogenic | 0.9686 | pathogenic | -0.135 | Destabilizing | 0.988 | D | 0.516 | neutral | None | None | None | None | N |
D/Q | 0.3376 | likely_benign | 0.3357 | benign | -0.352 | Destabilizing | 0.851 | D | 0.509 | neutral | None | None | None | None | N |
D/R | 0.5869 | likely_pathogenic | 0.584 | pathogenic | 0.091 | Stabilizing | 0.976 | D | 0.548 | neutral | None | None | None | None | N |
D/S | 0.1446 | likely_benign | 0.1454 | benign | -0.579 | Destabilizing | 0.919 | D | 0.465 | neutral | None | None | None | None | N |
D/T | 0.3534 | ambiguous | 0.3286 | benign | -0.362 | Destabilizing | 0.919 | D | 0.522 | neutral | None | None | None | None | N |
D/V | 0.3574 | ambiguous | 0.3406 | ambiguous | -0.135 | Destabilizing | 0.984 | D | 0.597 | neutral | N | 0.384876811 | None | None | N |
D/W | 0.9484 | likely_pathogenic | 0.9422 | pathogenic | -0.255 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/Y | 0.3732 | ambiguous | 0.3672 | ambiguous | -0.202 | Destabilizing | 0.995 | D | 0.665 | neutral | N | 0.502453344 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.