Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31584 | 94975;94976;94977 | chr2:178546678;178546677;178546676 | chr2:179411405;179411404;179411403 |
N2AB | 29943 | 90052;90053;90054 | chr2:178546678;178546677;178546676 | chr2:179411405;179411404;179411403 |
N2A | 29016 | 87271;87272;87273 | chr2:178546678;178546677;178546676 | chr2:179411405;179411404;179411403 |
N2B | 22519 | 67780;67781;67782 | chr2:178546678;178546677;178546676 | chr2:179411405;179411404;179411403 |
Novex-1 | 22644 | 68155;68156;68157 | chr2:178546678;178546677;178546676 | chr2:179411405;179411404;179411403 |
Novex-2 | 22711 | 68356;68357;68358 | chr2:178546678;178546677;178546676 | chr2:179411405;179411404;179411403 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1224689157 | -2.893 | 0.928 | D | 0.675 | 0.671 | 0.753032484505 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs1224689157 | -2.893 | 0.928 | D | 0.675 | 0.671 | 0.753032484505 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 5.65483E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.978 | D | 0.846 | 0.594 | 0.597040176542 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8586E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8508 | likely_pathogenic | 0.8378 | pathogenic | -2.567 | Highly Destabilizing | 0.928 | D | 0.675 | prob.neutral | D | 0.559885727 | None | None | N |
V/C | 0.9614 | likely_pathogenic | 0.9593 | pathogenic | -2.047 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.999 | pathogenic | -3.427 | Highly Destabilizing | 0.997 | D | 0.944 | deleterious | None | None | None | None | N |
V/E | 0.9975 | likely_pathogenic | 0.9966 | pathogenic | -3.115 | Highly Destabilizing | 0.996 | D | 0.933 | deleterious | D | 0.655950436 | None | None | N |
V/F | 0.9563 | likely_pathogenic | 0.9522 | pathogenic | -1.351 | Destabilizing | 0.983 | D | 0.899 | deleterious | None | None | None | None | N |
V/G | 0.9585 | likely_pathogenic | 0.9555 | pathogenic | -3.159 | Highly Destabilizing | 0.989 | D | 0.944 | deleterious | D | 0.655950436 | None | None | N |
V/H | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -2.925 | Highly Destabilizing | 0.999 | D | 0.92 | deleterious | None | None | None | None | N |
V/I | 0.1133 | likely_benign | 0.104 | benign | -0.836 | Destabilizing | 0.05 | N | 0.375 | neutral | None | None | None | None | N |
V/K | 0.9985 | likely_pathogenic | 0.9982 | pathogenic | -1.974 | Destabilizing | 0.992 | D | 0.934 | deleterious | None | None | None | None | N |
V/L | 0.782 | likely_pathogenic | 0.7474 | pathogenic | -0.836 | Destabilizing | 0.476 | N | 0.631 | neutral | D | 0.529331849 | None | None | N |
V/M | 0.8871 | likely_pathogenic | 0.8728 | pathogenic | -1.201 | Destabilizing | 0.978 | D | 0.846 | deleterious | D | 0.560139217 | None | None | N |
V/N | 0.9961 | likely_pathogenic | 0.9949 | pathogenic | -2.621 | Highly Destabilizing | 0.997 | D | 0.943 | deleterious | None | None | None | None | N |
V/P | 0.9964 | likely_pathogenic | 0.9943 | pathogenic | -1.396 | Destabilizing | 0.997 | D | 0.937 | deleterious | None | None | None | None | N |
V/Q | 0.9969 | likely_pathogenic | 0.9962 | pathogenic | -2.277 | Highly Destabilizing | 0.997 | D | 0.939 | deleterious | None | None | None | None | N |
V/R | 0.9959 | likely_pathogenic | 0.9954 | pathogenic | -2.017 | Highly Destabilizing | 0.997 | D | 0.946 | deleterious | None | None | None | None | N |
V/S | 0.9709 | likely_pathogenic | 0.9678 | pathogenic | -3.142 | Highly Destabilizing | 0.992 | D | 0.932 | deleterious | None | None | None | None | N |
V/T | 0.9431 | likely_pathogenic | 0.9413 | pathogenic | -2.679 | Highly Destabilizing | 0.944 | D | 0.759 | deleterious | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -1.891 | Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | N |
V/Y | 0.9967 | likely_pathogenic | 0.9962 | pathogenic | -1.638 | Destabilizing | 0.992 | D | 0.897 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.