Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31596 | 95011;95012;95013 | chr2:178546642;178546641;178546640 | chr2:179411369;179411368;179411367 |
N2AB | 29955 | 90088;90089;90090 | chr2:178546642;178546641;178546640 | chr2:179411369;179411368;179411367 |
N2A | 29028 | 87307;87308;87309 | chr2:178546642;178546641;178546640 | chr2:179411369;179411368;179411367 |
N2B | 22531 | 67816;67817;67818 | chr2:178546642;178546641;178546640 | chr2:179411369;179411368;179411367 |
Novex-1 | 22656 | 68191;68192;68193 | chr2:178546642;178546641;178546640 | chr2:179411369;179411368;179411367 |
Novex-2 | 22723 | 68392;68393;68394 | chr2:178546642;178546641;178546640 | chr2:179411369;179411368;179411367 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.103 | N | 0.385 | 0.171 | 0.149567049428 | gnomAD-4.0.0 | 6.84407E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99711E-07 | 0 | 0 |
G/E | None | None | 0.968 | N | 0.586 | 0.327 | 0.338592109245 | gnomAD-4.0.0 | 1.36881E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.52156E-05 | None | 0 | 0 | 8.99711E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0886 | likely_benign | 0.0778 | benign | -0.695 | Destabilizing | 0.103 | N | 0.385 | neutral | N | 0.312800495 | None | None | I |
G/C | 0.2724 | likely_benign | 0.2191 | benign | -1.004 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
G/D | 0.6228 | likely_pathogenic | 0.5267 | ambiguous | -0.781 | Destabilizing | 0.988 | D | 0.575 | neutral | None | None | None | None | I |
G/E | 0.5002 | ambiguous | 0.4026 | ambiguous | -0.917 | Destabilizing | 0.968 | D | 0.586 | neutral | N | 0.380870927 | None | None | I |
G/F | 0.7834 | likely_pathogenic | 0.7403 | pathogenic | -1.219 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | I |
G/H | 0.7296 | likely_pathogenic | 0.6555 | pathogenic | -0.97 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | I |
G/I | 0.4629 | ambiguous | 0.3563 | ambiguous | -0.653 | Destabilizing | 0.988 | D | 0.755 | deleterious | None | None | None | None | I |
G/K | 0.8658 | likely_pathogenic | 0.7786 | pathogenic | -1.077 | Destabilizing | 0.976 | D | 0.593 | neutral | None | None | None | None | I |
G/L | 0.6693 | likely_pathogenic | 0.5685 | pathogenic | -0.653 | Destabilizing | 0.976 | D | 0.665 | neutral | None | None | None | None | I |
G/M | 0.7177 | likely_pathogenic | 0.6231 | pathogenic | -0.564 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | I |
G/N | 0.6269 | likely_pathogenic | 0.5209 | ambiguous | -0.696 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | I |
G/P | 0.2285 | likely_benign | 0.2051 | benign | -0.631 | Destabilizing | 0.015 | N | 0.444 | neutral | None | None | None | None | I |
G/Q | 0.6853 | likely_pathogenic | 0.5805 | pathogenic | -0.996 | Destabilizing | 0.996 | D | 0.687 | prob.neutral | None | None | None | None | I |
G/R | 0.7711 | likely_pathogenic | 0.6703 | pathogenic | -0.644 | Destabilizing | 0.984 | D | 0.686 | prob.neutral | N | 0.385084668 | None | None | I |
G/S | 0.139 | likely_benign | 0.114 | benign | -0.923 | Destabilizing | 0.851 | D | 0.444 | neutral | None | None | None | None | I |
G/T | 0.3126 | likely_benign | 0.2391 | benign | -0.99 | Destabilizing | 0.976 | D | 0.572 | neutral | None | None | None | None | I |
G/V | 0.2978 | likely_benign | 0.22 | benign | -0.631 | Destabilizing | 0.968 | D | 0.651 | neutral | N | 0.389759769 | None | None | I |
G/W | 0.6279 | likely_pathogenic | 0.6066 | pathogenic | -1.361 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | N | 0.416101009 | None | None | I |
G/Y | 0.5937 | likely_pathogenic | 0.5464 | ambiguous | -1.033 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.