Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31600 | 95023;95024;95025 | chr2:178546630;178546629;178546628 | chr2:179411357;179411356;179411355 |
N2AB | 29959 | 90100;90101;90102 | chr2:178546630;178546629;178546628 | chr2:179411357;179411356;179411355 |
N2A | 29032 | 87319;87320;87321 | chr2:178546630;178546629;178546628 | chr2:179411357;179411356;179411355 |
N2B | 22535 | 67828;67829;67830 | chr2:178546630;178546629;178546628 | chr2:179411357;179411356;179411355 |
Novex-1 | 22660 | 68203;68204;68205 | chr2:178546630;178546629;178546628 | chr2:179411357;179411356;179411355 |
Novex-2 | 22727 | 68404;68405;68406 | chr2:178546630;178546629;178546628 | chr2:179411357;179411356;179411355 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1363231803 | -1.307 | 0.807 | N | 0.643 | 0.257 | 0.227260227426 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
T/A | rs1363231803 | -1.307 | 0.807 | N | 0.643 | 0.257 | 0.227260227426 | gnomAD-4.0.0 | 2.05454E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70103E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3597 | ambiguous | 0.3448 | ambiguous | -1.135 | Destabilizing | 0.807 | D | 0.643 | neutral | N | 0.486605295 | None | None | N |
T/C | 0.8322 | likely_pathogenic | 0.8142 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.558 | neutral | None | None | None | None | N |
T/D | 0.9816 | likely_pathogenic | 0.9742 | pathogenic | -1.141 | Destabilizing | 0.99 | D | 0.575 | neutral | None | None | None | None | N |
T/E | 0.9831 | likely_pathogenic | 0.9769 | pathogenic | -0.971 | Destabilizing | 0.99 | D | 0.564 | neutral | None | None | None | None | N |
T/F | 0.9747 | likely_pathogenic | 0.9661 | pathogenic | -0.789 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
T/G | 0.8044 | likely_pathogenic | 0.7841 | pathogenic | -1.548 | Destabilizing | 0.964 | D | 0.721 | deleterious | None | None | None | None | N |
T/H | 0.9697 | likely_pathogenic | 0.9638 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/I | 0.8942 | likely_pathogenic | 0.8513 | pathogenic | -0.061 | Destabilizing | 0.993 | D | 0.523 | neutral | N | 0.467046236 | None | None | N |
T/K | 0.9808 | likely_pathogenic | 0.9753 | pathogenic | -0.679 | Destabilizing | 0.986 | D | 0.564 | neutral | N | 0.487872743 | None | None | N |
T/L | 0.7008 | likely_pathogenic | 0.6533 | pathogenic | -0.061 | Destabilizing | 0.982 | D | 0.613 | neutral | None | None | None | None | N |
T/M | 0.5843 | likely_pathogenic | 0.5252 | ambiguous | -0.017 | Destabilizing | 1.0 | D | 0.553 | neutral | None | None | None | None | N |
T/N | 0.8913 | likely_pathogenic | 0.8483 | pathogenic | -1.229 | Destabilizing | 0.99 | D | 0.607 | neutral | None | None | None | None | N |
T/P | 0.8627 | likely_pathogenic | 0.8282 | pathogenic | -0.386 | Destabilizing | 0.993 | D | 0.517 | neutral | N | 0.467299726 | None | None | N |
T/Q | 0.9617 | likely_pathogenic | 0.9539 | pathogenic | -1.062 | Destabilizing | 0.995 | D | 0.479 | neutral | None | None | None | None | N |
T/R | 0.9636 | likely_pathogenic | 0.9561 | pathogenic | -0.801 | Destabilizing | 0.993 | D | 0.5 | neutral | N | 0.510838843 | None | None | N |
T/S | 0.2628 | likely_benign | 0.2459 | benign | -1.503 | Destabilizing | 0.441 | N | 0.36 | neutral | N | 0.397290669 | None | None | N |
T/V | 0.6536 | likely_pathogenic | 0.5986 | pathogenic | -0.386 | Destabilizing | 0.982 | D | 0.599 | neutral | None | None | None | None | N |
T/W | 0.9939 | likely_pathogenic | 0.9919 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | N |
T/Y | 0.9844 | likely_pathogenic | 0.9781 | pathogenic | -0.534 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.