Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31602 | 95029;95030;95031 | chr2:178546624;178546623;178546622 | chr2:179411351;179411350;179411349 |
N2AB | 29961 | 90106;90107;90108 | chr2:178546624;178546623;178546622 | chr2:179411351;179411350;179411349 |
N2A | 29034 | 87325;87326;87327 | chr2:178546624;178546623;178546622 | chr2:179411351;179411350;179411349 |
N2B | 22537 | 67834;67835;67836 | chr2:178546624;178546623;178546622 | chr2:179411351;179411350;179411349 |
Novex-1 | 22662 | 68209;68210;68211 | chr2:178546624;178546623;178546622 | chr2:179411351;179411350;179411349 |
Novex-2 | 22729 | 68410;68411;68412 | chr2:178546624;178546623;178546622 | chr2:179411351;179411350;179411349 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs1697282371 | None | 0.376 | N | 0.465 | 0.15 | 0.294206760003 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs1697282371 | None | 0.376 | N | 0.465 | 0.15 | 0.294206760003 | gnomAD-4.0.0 | 2.56835E-06 | None | None | None | None | N | None | 3.38581E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0691 | likely_benign | 0.0675 | benign | -0.637 | Destabilizing | 0.002 | N | 0.357 | neutral | N | 0.501527837 | None | None | N |
P/C | 0.5054 | ambiguous | 0.5076 | ambiguous | -0.716 | Destabilizing | 0.977 | D | 0.669 | prob.neutral | None | None | None | None | N |
P/D | 0.5413 | ambiguous | 0.54 | ambiguous | -0.373 | Destabilizing | 0.444 | N | 0.459 | neutral | None | None | None | None | N |
P/E | 0.3174 | likely_benign | 0.3165 | benign | -0.479 | Destabilizing | 0.011 | N | 0.42 | neutral | None | None | None | None | N |
P/F | 0.4359 | ambiguous | 0.4259 | ambiguous | -0.771 | Destabilizing | 0.848 | D | 0.68 | prob.neutral | None | None | None | None | N |
P/G | 0.3548 | ambiguous | 0.3365 | benign | -0.796 | Destabilizing | 0.444 | N | 0.556 | neutral | None | None | None | None | N |
P/H | 0.2525 | likely_benign | 0.2525 | benign | -0.301 | Destabilizing | 0.97 | D | 0.633 | neutral | D | 0.524160612 | None | None | N |
P/I | 0.2688 | likely_benign | 0.2495 | benign | -0.365 | Destabilizing | 0.737 | D | 0.647 | neutral | None | None | None | None | N |
P/K | 0.3194 | likely_benign | 0.3205 | benign | -0.54 | Destabilizing | 0.444 | N | 0.455 | neutral | None | None | None | None | N |
P/L | 0.112 | likely_benign | 0.1045 | benign | -0.365 | Destabilizing | 0.004 | N | 0.665 | prob.neutral | N | 0.480252647 | None | None | N |
P/M | 0.2527 | likely_benign | 0.238 | benign | -0.35 | Destabilizing | 0.955 | D | 0.637 | neutral | None | None | None | None | N |
P/N | 0.3783 | ambiguous | 0.3572 | ambiguous | -0.306 | Destabilizing | 0.848 | D | 0.648 | neutral | None | None | None | None | N |
P/Q | 0.1882 | likely_benign | 0.1883 | benign | -0.565 | Destabilizing | 0.737 | D | 0.485 | neutral | None | None | None | None | N |
P/R | 0.2123 | likely_benign | 0.2154 | benign | 0.02 | Stabilizing | 0.808 | D | 0.623 | neutral | N | 0.505549378 | None | None | N |
P/S | 0.1402 | likely_benign | 0.1359 | benign | -0.71 | Destabilizing | 0.376 | N | 0.465 | neutral | N | 0.46445257 | None | None | N |
P/T | 0.1098 | likely_benign | 0.1029 | benign | -0.712 | Destabilizing | 0.546 | D | 0.437 | neutral | N | 0.463211575 | None | None | N |
P/V | 0.1786 | likely_benign | 0.1698 | benign | -0.42 | Destabilizing | 0.444 | N | 0.56 | neutral | None | None | None | None | N |
P/W | 0.667 | likely_pathogenic | 0.6666 | pathogenic | -0.836 | Destabilizing | 0.992 | D | 0.665 | prob.neutral | None | None | None | None | N |
P/Y | 0.4701 | ambiguous | 0.4561 | ambiguous | -0.541 | Destabilizing | 0.972 | D | 0.681 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.