Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31604 | 95035;95036;95037 | chr2:178546618;178546617;178546616 | chr2:179411345;179411344;179411343 |
N2AB | 29963 | 90112;90113;90114 | chr2:178546618;178546617;178546616 | chr2:179411345;179411344;179411343 |
N2A | 29036 | 87331;87332;87333 | chr2:178546618;178546617;178546616 | chr2:179411345;179411344;179411343 |
N2B | 22539 | 67840;67841;67842 | chr2:178546618;178546617;178546616 | chr2:179411345;179411344;179411343 |
Novex-1 | 22664 | 68215;68216;68217 | chr2:178546618;178546617;178546616 | chr2:179411345;179411344;179411343 |
Novex-2 | 22731 | 68416;68417;68418 | chr2:178546618;178546617;178546616 | chr2:179411345;179411344;179411343 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.022 | N | 0.296 | 0.121 | 0.188950314367 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
T/P | None | None | 0.981 | N | 0.694 | 0.279 | 0.485776496936 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0939 | likely_benign | 0.0871 | benign | -0.59 | Destabilizing | 0.022 | N | 0.296 | neutral | N | 0.494447149 | None | None | N |
T/C | 0.4234 | ambiguous | 0.4156 | ambiguous | -0.383 | Destabilizing | 0.996 | D | 0.655 | prob.neutral | None | None | None | None | N |
T/D | 0.5276 | ambiguous | 0.5405 | ambiguous | 0.068 | Stabilizing | 0.985 | D | 0.637 | neutral | None | None | None | None | N |
T/E | 0.3649 | ambiguous | 0.3748 | ambiguous | 0.025 | Stabilizing | 0.971 | D | 0.603 | neutral | None | None | None | None | N |
T/F | 0.2314 | likely_benign | 0.2233 | benign | -0.865 | Destabilizing | 0.971 | D | 0.794 | deleterious | None | None | None | None | N |
T/G | 0.3837 | ambiguous | 0.3608 | ambiguous | -0.786 | Destabilizing | 0.825 | D | 0.625 | neutral | None | None | None | None | N |
T/H | 0.2867 | likely_benign | 0.2778 | benign | -1.102 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
T/I | 0.0957 | likely_benign | 0.0961 | benign | -0.178 | Destabilizing | 0.049 | N | 0.313 | neutral | N | 0.392456145 | None | None | N |
T/K | 0.2558 | likely_benign | 0.254 | benign | -0.559 | Destabilizing | 0.971 | D | 0.597 | neutral | None | None | None | None | N |
T/L | 0.0844 | likely_benign | 0.0811 | benign | -0.178 | Destabilizing | 0.66 | D | 0.519 | neutral | None | None | None | None | N |
T/M | 0.0872 | likely_benign | 0.0864 | benign | 0.064 | Stabilizing | 0.992 | D | 0.665 | prob.neutral | None | None | None | None | N |
T/N | 0.1701 | likely_benign | 0.1651 | benign | -0.4 | Destabilizing | 0.981 | D | 0.621 | neutral | N | 0.520844316 | None | None | N |
T/P | 0.154 | likely_benign | 0.1383 | benign | -0.284 | Destabilizing | 0.981 | D | 0.694 | prob.delet. | N | 0.51416906 | None | None | N |
T/Q | 0.2311 | likely_benign | 0.2262 | benign | -0.614 | Destabilizing | 0.985 | D | 0.661 | prob.neutral | None | None | None | None | N |
T/R | 0.2078 | likely_benign | 0.1982 | benign | -0.298 | Destabilizing | 0.985 | D | 0.694 | prob.delet. | None | None | None | None | N |
T/S | 0.141 | likely_benign | 0.1332 | benign | -0.66 | Destabilizing | 0.78 | D | 0.515 | neutral | N | 0.512262119 | None | None | N |
T/V | 0.0894 | likely_benign | 0.0891 | benign | -0.284 | Destabilizing | 0.66 | D | 0.475 | neutral | None | None | None | None | N |
T/W | 0.6552 | likely_pathogenic | 0.6257 | pathogenic | -0.811 | Destabilizing | 0.999 | D | 0.7 | prob.delet. | None | None | None | None | N |
T/Y | 0.3146 | likely_benign | 0.3018 | benign | -0.565 | Destabilizing | 0.995 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.