Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31605 | 95038;95039;95040 | chr2:178546615;178546614;178546613 | chr2:179411342;179411341;179411340 |
N2AB | 29964 | 90115;90116;90117 | chr2:178546615;178546614;178546613 | chr2:179411342;179411341;179411340 |
N2A | 29037 | 87334;87335;87336 | chr2:178546615;178546614;178546613 | chr2:179411342;179411341;179411340 |
N2B | 22540 | 67843;67844;67845 | chr2:178546615;178546614;178546613 | chr2:179411342;179411341;179411340 |
Novex-1 | 22665 | 68218;68219;68220 | chr2:178546615;178546614;178546613 | chr2:179411342;179411341;179411340 |
Novex-2 | 22732 | 68419;68420;68421 | chr2:178546615;178546614;178546613 | chr2:179411342;179411341;179411340 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | rs1308471692 | None | 0.999 | N | 0.837 | 0.512 | 0.618750016433 | gnomAD-4.0.0 | 1.60349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89041E-06 | 0 | 0 |
C/Y | rs991386516 | None | 0.999 | N | 0.832 | 0.362 | 0.68565156927 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7768 | likely_pathogenic | 0.7586 | pathogenic | -0.166 | Destabilizing | 0.995 | D | 0.606 | neutral | None | None | None | None | N |
C/D | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -1.414 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
C/E | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | -1.297 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
C/F | 0.9604 | likely_pathogenic | 0.9566 | pathogenic | -0.545 | Destabilizing | 0.999 | D | 0.836 | deleterious | N | 0.486121088 | None | None | N |
C/G | 0.8788 | likely_pathogenic | 0.8498 | pathogenic | -0.367 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.489162962 | None | None | N |
C/H | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -1.22 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
C/I | 0.8356 | likely_pathogenic | 0.8316 | pathogenic | 0.287 | Stabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
C/K | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | 0.058 | Stabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
C/L | 0.8635 | likely_pathogenic | 0.854 | pathogenic | 0.287 | Stabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
C/M | 0.9717 | likely_pathogenic | 0.9703 | pathogenic | 0.304 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
C/N | 0.9944 | likely_pathogenic | 0.9932 | pathogenic | -0.4 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
C/P | 0.9555 | likely_pathogenic | 0.95 | pathogenic | 0.162 | Stabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
C/Q | 0.9983 | likely_pathogenic | 0.9979 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
C/R | 0.9947 | likely_pathogenic | 0.9937 | pathogenic | -0.35 | Destabilizing | 0.999 | D | 0.79 | deleterious | N | 0.489416452 | None | None | N |
C/S | 0.9072 | likely_pathogenic | 0.8945 | pathogenic | -0.348 | Destabilizing | 0.999 | D | 0.837 | deleterious | N | 0.476881604 | None | None | N |
C/T | 0.9075 | likely_pathogenic | 0.9107 | pathogenic | -0.102 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
C/V | 0.6352 | likely_pathogenic | 0.6321 | pathogenic | 0.162 | Stabilizing | 0.998 | D | 0.731 | deleterious | None | None | None | None | N |
C/W | 0.9966 | likely_pathogenic | 0.9965 | pathogenic | -1.11 | Destabilizing | 1.0 | D | 0.8 | deleterious | N | 0.490176921 | None | None | N |
C/Y | 0.9934 | likely_pathogenic | 0.992 | pathogenic | -0.561 | Destabilizing | 0.999 | D | 0.832 | deleterious | N | 0.488909473 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.