Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31607 | 95044;95045;95046 | chr2:178546609;178546608;178546607 | chr2:179411336;179411335;179411334 |
N2AB | 29966 | 90121;90122;90123 | chr2:178546609;178546608;178546607 | chr2:179411336;179411335;179411334 |
N2A | 29039 | 87340;87341;87342 | chr2:178546609;178546608;178546607 | chr2:179411336;179411335;179411334 |
N2B | 22542 | 67849;67850;67851 | chr2:178546609;178546608;178546607 | chr2:179411336;179411335;179411334 |
Novex-1 | 22667 | 68224;68225;68226 | chr2:178546609;178546608;178546607 | chr2:179411336;179411335;179411334 |
Novex-2 | 22734 | 68425;68426;68427 | chr2:178546609;178546608;178546607 | chr2:179411336;179411335;179411334 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 1.0 | N | 0.762 | 0.279 | 0.396645960531 | gnomAD-4.0.0 | 3.20977E-06 | None | None | None | None | N | None | 0 | 2.29274E-05 | None | 0 | 0 | None | 0 | 0 | 2.89337E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7329 | likely_pathogenic | 0.7486 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.72 | deleterious | N | 0.506816226 | None | None | N |
D/C | 0.9842 | likely_pathogenic | 0.9868 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
D/E | 0.6972 | likely_pathogenic | 0.738 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.531 | neutral | N | 0.465142962 | None | None | N |
D/F | 0.9797 | likely_pathogenic | 0.9829 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
D/G | 0.8028 | likely_pathogenic | 0.822 | pathogenic | -0.35 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.477806657 | None | None | N |
D/H | 0.9347 | likely_pathogenic | 0.947 | pathogenic | -0.097 | Destabilizing | 1.0 | D | 0.871 | deleterious | N | 0.484554607 | None | None | N |
D/I | 0.9681 | likely_pathogenic | 0.9717 | pathogenic | 0.239 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
D/K | 0.9628 | likely_pathogenic | 0.9706 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
D/L | 0.9312 | likely_pathogenic | 0.9363 | pathogenic | 0.239 | Stabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
D/M | 0.9762 | likely_pathogenic | 0.9808 | pathogenic | 0.342 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
D/N | 0.5553 | ambiguous | 0.5981 | pathogenic | 0.14 | Stabilizing | 1.0 | D | 0.762 | deleterious | N | 0.468020514 | None | None | N |
D/P | 0.9701 | likely_pathogenic | 0.9709 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
D/Q | 0.9382 | likely_pathogenic | 0.9521 | pathogenic | 0.152 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
D/R | 0.9655 | likely_pathogenic | 0.9721 | pathogenic | 0.425 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
D/S | 0.6582 | likely_pathogenic | 0.7072 | pathogenic | 0.013 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
D/T | 0.8896 | likely_pathogenic | 0.9055 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
D/V | 0.8958 | likely_pathogenic | 0.9072 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.769 | deleterious | N | 0.494643464 | None | None | N |
D/W | 0.9938 | likely_pathogenic | 0.9949 | pathogenic | -0.165 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
D/Y | 0.8592 | likely_pathogenic | 0.878 | pathogenic | -0.017 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.507267217 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.