Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31623 | 95092;95093;95094 | chr2:178546464;178546463;178546462 | chr2:179411191;179411190;179411189 |
N2AB | 29982 | 90169;90170;90171 | chr2:178546464;178546463;178546462 | chr2:179411191;179411190;179411189 |
N2A | 29055 | 87388;87389;87390 | chr2:178546464;178546463;178546462 | chr2:179411191;179411190;179411189 |
N2B | 22558 | 67897;67898;67899 | chr2:178546464;178546463;178546462 | chr2:179411191;179411190;179411189 |
Novex-1 | 22683 | 68272;68273;68274 | chr2:178546464;178546463;178546462 | chr2:179411191;179411190;179411189 |
Novex-2 | 22750 | 68473;68474;68475 | chr2:178546464;178546463;178546462 | chr2:179411191;179411190;179411189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.645 | N | 0.546 | 0.477 | 0.39208347742 | gnomAD-4.0.0 | 6.84334E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5227E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2137 | likely_benign | 0.2152 | benign | 0.105 | Stabilizing | 0.477 | N | 0.546 | neutral | D | 0.529680883 | None | None | N |
D/C | 0.6466 | likely_pathogenic | 0.6652 | pathogenic | -0.179 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/E | 0.1253 | likely_benign | 0.1322 | benign | -0.375 | Destabilizing | 0.002 | N | 0.255 | neutral | N | 0.432284835 | None | None | N |
D/F | 0.6426 | likely_pathogenic | 0.6581 | pathogenic | -0.025 | Destabilizing | 0.981 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/G | 0.1801 | likely_benign | 0.1797 | benign | 0.013 | Stabilizing | 0.645 | D | 0.546 | neutral | N | 0.503126973 | None | None | N |
D/H | 0.3139 | likely_benign | 0.3266 | benign | 0.622 | Stabilizing | 0.98 | D | 0.643 | neutral | D | 0.540975312 | None | None | N |
D/I | 0.3973 | ambiguous | 0.4259 | ambiguous | 0.277 | Stabilizing | 0.945 | D | 0.745 | deleterious | None | None | None | None | N |
D/K | 0.3576 | ambiguous | 0.3778 | ambiguous | 0.435 | Stabilizing | 0.547 | D | 0.516 | neutral | None | None | None | None | N |
D/L | 0.4034 | ambiguous | 0.4159 | ambiguous | 0.277 | Stabilizing | 0.894 | D | 0.737 | prob.delet. | None | None | None | None | N |
D/M | 0.6016 | likely_pathogenic | 0.6206 | pathogenic | 0.016 | Stabilizing | 0.995 | D | 0.742 | deleterious | None | None | None | None | N |
D/N | 0.1147 | likely_benign | 0.1205 | benign | 0.217 | Stabilizing | 0.645 | D | 0.523 | neutral | N | 0.483561804 | None | None | N |
D/P | 0.4688 | ambiguous | 0.4753 | ambiguous | 0.238 | Stabilizing | 0.945 | D | 0.65 | neutral | None | None | None | None | N |
D/Q | 0.2954 | likely_benign | 0.3072 | benign | 0.207 | Stabilizing | 0.809 | D | 0.537 | neutral | None | None | None | None | N |
D/R | 0.4071 | ambiguous | 0.4216 | ambiguous | 0.652 | Stabilizing | 0.894 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/S | 0.1378 | likely_benign | 0.1372 | benign | 0.129 | Stabilizing | 0.547 | D | 0.48 | neutral | None | None | None | None | N |
D/T | 0.2572 | likely_benign | 0.2656 | benign | 0.209 | Stabilizing | 0.894 | D | 0.585 | neutral | None | None | None | None | N |
D/V | 0.2574 | likely_benign | 0.2685 | benign | 0.238 | Stabilizing | 0.864 | D | 0.731 | prob.delet. | D | 0.541148671 | None | None | N |
D/W | 0.8739 | likely_pathogenic | 0.8738 | pathogenic | -0.012 | Destabilizing | 0.995 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/Y | 0.296 | likely_benign | 0.3067 | benign | 0.196 | Stabilizing | 0.975 | D | 0.737 | prob.delet. | N | 0.504140931 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.