Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31625 | 95098;95099;95100 | chr2:178546458;178546457;178546456 | chr2:179411185;179411184;179411183 |
N2AB | 29984 | 90175;90176;90177 | chr2:178546458;178546457;178546456 | chr2:179411185;179411184;179411183 |
N2A | 29057 | 87394;87395;87396 | chr2:178546458;178546457;178546456 | chr2:179411185;179411184;179411183 |
N2B | 22560 | 67903;67904;67905 | chr2:178546458;178546457;178546456 | chr2:179411185;179411184;179411183 |
Novex-1 | 22685 | 68278;68279;68280 | chr2:178546458;178546457;178546456 | chr2:179411185;179411184;179411183 |
Novex-2 | 22752 | 68479;68480;68481 | chr2:178546458;178546457;178546456 | chr2:179411185;179411184;179411183 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1697179878 | None | 0.17 | N | 0.229 | 0.144 | 0.464098490096 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1697179878 | None | 0.17 | N | 0.229 | 0.144 | 0.464098490096 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | I | None | 2.41394E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5479 | ambiguous | 0.5612 | ambiguous | -0.903 | Destabilizing | 0.939 | D | 0.457 | neutral | N | 0.490953611 | None | None | I |
V/C | 0.8664 | likely_pathogenic | 0.8647 | pathogenic | -0.97 | Destabilizing | 0.999 | D | 0.582 | neutral | None | None | None | None | I |
V/D | 0.9103 | likely_pathogenic | 0.9113 | pathogenic | -0.332 | Destabilizing | 0.997 | D | 0.732 | prob.delet. | D | 0.533495678 | None | None | I |
V/E | 0.7861 | likely_pathogenic | 0.791 | pathogenic | -0.339 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | I |
V/F | 0.2976 | likely_benign | 0.3035 | benign | -0.585 | Destabilizing | 0.982 | D | 0.621 | neutral | N | 0.505983674 | None | None | I |
V/G | 0.6959 | likely_pathogenic | 0.7033 | pathogenic | -1.183 | Destabilizing | 0.997 | D | 0.703 | prob.neutral | D | 0.532735209 | None | None | I |
V/H | 0.8602 | likely_pathogenic | 0.8657 | pathogenic | -0.582 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
V/I | 0.0873 | likely_benign | 0.088 | benign | -0.26 | Destabilizing | 0.17 | N | 0.229 | neutral | N | 0.446886141 | None | None | I |
V/K | 0.7667 | likely_pathogenic | 0.7692 | pathogenic | -0.837 | Destabilizing | 0.993 | D | 0.668 | neutral | None | None | None | None | I |
V/L | 0.1996 | likely_benign | 0.2009 | benign | -0.26 | Destabilizing | 0.046 | N | 0.284 | neutral | N | 0.494215941 | None | None | I |
V/M | 0.2415 | likely_benign | 0.2532 | benign | -0.447 | Destabilizing | 0.986 | D | 0.527 | neutral | None | None | None | None | I |
V/N | 0.8317 | likely_pathogenic | 0.8317 | pathogenic | -0.744 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | I |
V/P | 0.9147 | likely_pathogenic | 0.9159 | pathogenic | -0.438 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/Q | 0.6937 | likely_pathogenic | 0.7007 | pathogenic | -0.834 | Destabilizing | 0.998 | D | 0.675 | prob.neutral | None | None | None | None | I |
V/R | 0.7274 | likely_pathogenic | 0.7353 | pathogenic | -0.41 | Destabilizing | 0.993 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/S | 0.7482 | likely_pathogenic | 0.7586 | pathogenic | -1.289 | Destabilizing | 0.993 | D | 0.646 | neutral | None | None | None | None | I |
V/T | 0.6053 | likely_pathogenic | 0.611 | pathogenic | -1.17 | Destabilizing | 0.976 | D | 0.481 | neutral | None | None | None | None | I |
V/W | 0.924 | likely_pathogenic | 0.9248 | pathogenic | -0.729 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | I |
V/Y | 0.7713 | likely_pathogenic | 0.7754 | pathogenic | -0.428 | Destabilizing | 0.993 | D | 0.629 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.