Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31632 | 95119;95120;95121 | chr2:178546437;178546436;178546435 | chr2:179411164;179411163;179411162 |
N2AB | 29991 | 90196;90197;90198 | chr2:178546437;178546436;178546435 | chr2:179411164;179411163;179411162 |
N2A | 29064 | 87415;87416;87417 | chr2:178546437;178546436;178546435 | chr2:179411164;179411163;179411162 |
N2B | 22567 | 67924;67925;67926 | chr2:178546437;178546436;178546435 | chr2:179411164;179411163;179411162 |
Novex-1 | 22692 | 68299;68300;68301 | chr2:178546437;178546436;178546435 | chr2:179411164;179411163;179411162 |
Novex-2 | 22759 | 68500;68501;68502 | chr2:178546437;178546436;178546435 | chr2:179411164;179411163;179411162 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 1.0 | N | 0.729 | 0.493 | 0.282575091529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6032 | likely_pathogenic | 0.6176 | pathogenic | -0.576 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.473679514 | None | None | I |
D/C | 0.9295 | likely_pathogenic | 0.9284 | pathogenic | -0.267 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
D/E | 0.5909 | likely_pathogenic | 0.6158 | pathogenic | -0.509 | Destabilizing | 1.0 | D | 0.433 | neutral | N | 0.475506311 | None | None | I |
D/F | 0.9316 | likely_pathogenic | 0.9346 | pathogenic | 0.038 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
D/G | 0.7492 | likely_pathogenic | 0.768 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.477114505 | None | None | I |
D/H | 0.7428 | likely_pathogenic | 0.7531 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.454997779 | None | None | I |
D/I | 0.8174 | likely_pathogenic | 0.8302 | pathogenic | 0.369 | Stabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
D/K | 0.9233 | likely_pathogenic | 0.936 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
D/L | 0.8298 | likely_pathogenic | 0.8447 | pathogenic | 0.369 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
D/M | 0.9298 | likely_pathogenic | 0.938 | pathogenic | 0.739 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
D/N | 0.2529 | likely_benign | 0.2585 | benign | -0.862 | Destabilizing | 1.0 | D | 0.633 | neutral | N | 0.473986158 | None | None | I |
D/P | 0.8872 | likely_pathogenic | 0.8868 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
D/Q | 0.855 | likely_pathogenic | 0.8717 | pathogenic | -0.692 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
D/R | 0.9216 | likely_pathogenic | 0.9333 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
D/S | 0.3558 | ambiguous | 0.3592 | ambiguous | -1.076 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
D/T | 0.5839 | likely_pathogenic | 0.5931 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
D/V | 0.6276 | likely_pathogenic | 0.6444 | pathogenic | 0.079 | Stabilizing | 1.0 | D | 0.751 | deleterious | N | 0.470081848 | None | None | I |
D/W | 0.9886 | likely_pathogenic | 0.9891 | pathogenic | 0.305 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
D/Y | 0.6813 | likely_pathogenic | 0.6921 | pathogenic | 0.3 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.466354084 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.