Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31639 | 95140;95141;95142 | chr2:178546416;178546415;178546414 | chr2:179411143;179411142;179411141 |
N2AB | 29998 | 90217;90218;90219 | chr2:178546416;178546415;178546414 | chr2:179411143;179411142;179411141 |
N2A | 29071 | 87436;87437;87438 | chr2:178546416;178546415;178546414 | chr2:179411143;179411142;179411141 |
N2B | 22574 | 67945;67946;67947 | chr2:178546416;178546415;178546414 | chr2:179411143;179411142;179411141 |
Novex-1 | 22699 | 68320;68321;68322 | chr2:178546416;178546415;178546414 | chr2:179411143;179411142;179411141 |
Novex-2 | 22766 | 68521;68522;68523 | chr2:178546416;178546415;178546414 | chr2:179411143;179411142;179411141 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs759136839 | -1.733 | 0.939 | N | 0.59 | 0.581 | 0.57068417637 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs759136839 | -1.733 | 0.939 | N | 0.59 | 0.581 | 0.57068417637 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4728 | ambiguous | 0.477 | ambiguous | -0.93 | Destabilizing | 0.939 | D | 0.59 | neutral | N | 0.51024976 | None | None | N |
V/C | 0.9412 | likely_pathogenic | 0.9394 | pathogenic | -0.946 | Destabilizing | 0.999 | D | 0.792 | deleterious | None | None | None | None | N |
V/D | 0.9953 | likely_pathogenic | 0.9954 | pathogenic | -0.199 | Destabilizing | 0.997 | D | 0.837 | deleterious | D | 0.601552468 | None | None | N |
V/E | 0.9841 | likely_pathogenic | 0.9845 | pathogenic | -0.229 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
V/F | 0.6016 | likely_pathogenic | 0.6005 | pathogenic | -0.749 | Destabilizing | 0.982 | D | 0.797 | deleterious | D | 0.540079779 | None | None | N |
V/G | 0.8706 | likely_pathogenic | 0.8762 | pathogenic | -1.186 | Destabilizing | 0.997 | D | 0.827 | deleterious | D | 0.585533107 | None | None | N |
V/H | 0.9929 | likely_pathogenic | 0.9926 | pathogenic | -0.621 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.093 | likely_benign | 0.0931 | benign | -0.358 | Destabilizing | 0.046 | N | 0.224 | neutral | N | 0.465264045 | None | None | N |
V/K | 0.987 | likely_pathogenic | 0.9861 | pathogenic | -0.74 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | N |
V/L | 0.5464 | ambiguous | 0.5358 | ambiguous | -0.358 | Destabilizing | 0.76 | D | 0.59 | neutral | D | 0.558178757 | None | None | N |
V/M | 0.5484 | ambiguous | 0.5474 | ambiguous | -0.472 | Destabilizing | 0.986 | D | 0.757 | deleterious | None | None | None | None | N |
V/N | 0.9857 | likely_pathogenic | 0.9854 | pathogenic | -0.553 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/P | 0.9764 | likely_pathogenic | 0.9753 | pathogenic | -0.512 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
V/Q | 0.9801 | likely_pathogenic | 0.9789 | pathogenic | -0.673 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
V/R | 0.9729 | likely_pathogenic | 0.9709 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | N |
V/S | 0.859 | likely_pathogenic | 0.8606 | pathogenic | -1.114 | Destabilizing | 0.993 | D | 0.807 | deleterious | None | None | None | None | N |
V/T | 0.5291 | ambiguous | 0.5237 | ambiguous | -1.015 | Destabilizing | 0.953 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/W | 0.989 | likely_pathogenic | 0.9885 | pathogenic | -0.85 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
V/Y | 0.9601 | likely_pathogenic | 0.9577 | pathogenic | -0.557 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.