Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31642 | 95149;95150;95151 | chr2:178546407;178546406;178546405 | chr2:179411134;179411133;179411132 |
N2AB | 30001 | 90226;90227;90228 | chr2:178546407;178546406;178546405 | chr2:179411134;179411133;179411132 |
N2A | 29074 | 87445;87446;87447 | chr2:178546407;178546406;178546405 | chr2:179411134;179411133;179411132 |
N2B | 22577 | 67954;67955;67956 | chr2:178546407;178546406;178546405 | chr2:179411134;179411133;179411132 |
Novex-1 | 22702 | 68329;68330;68331 | chr2:178546407;178546406;178546405 | chr2:179411134;179411133;179411132 |
Novex-2 | 22769 | 68530;68531;68532 | chr2:178546407;178546406;178546405 | chr2:179411134;179411133;179411132 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.652 | 0.335 | 0.399449838166 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99489E-07 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9346 | likely_pathogenic | 0.9452 | pathogenic | -0.042 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/C | 0.9222 | likely_pathogenic | 0.927 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
K/D | 0.9904 | likely_pathogenic | 0.9913 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
K/E | 0.8818 | likely_pathogenic | 0.901 | pathogenic | -0.428 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.467410555 | None | None | I |
K/F | 0.957 | likely_pathogenic | 0.9596 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
K/G | 0.9688 | likely_pathogenic | 0.9749 | pathogenic | -0.14 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/H | 0.6893 | likely_pathogenic | 0.6787 | pathogenic | -0.194 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
K/I | 0.734 | likely_pathogenic | 0.7682 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.510702759 | None | None | I |
K/L | 0.7697 | likely_pathogenic | 0.8106 | pathogenic | 0.136 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | I |
K/M | 0.6372 | likely_pathogenic | 0.6869 | pathogenic | -0.23 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
K/N | 0.9484 | likely_pathogenic | 0.9568 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.472683089 | None | None | I |
K/P | 0.996 | likely_pathogenic | 0.9964 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/Q | 0.5195 | ambiguous | 0.5544 | ambiguous | -0.219 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.515049787 | None | None | I |
K/R | 0.1358 | likely_benign | 0.1397 | benign | -0.171 | Destabilizing | 0.999 | D | 0.652 | neutral | N | 0.41519501 | None | None | I |
K/S | 0.9449 | likely_pathogenic | 0.9544 | pathogenic | -0.414 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | I |
K/T | 0.78 | likely_pathogenic | 0.8113 | pathogenic | -0.333 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.500619052 | None | None | I |
K/V | 0.7316 | likely_pathogenic | 0.7668 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | I |
K/W | 0.9612 | likely_pathogenic | 0.9589 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
K/Y | 0.9071 | likely_pathogenic | 0.9049 | pathogenic | -0.208 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.