Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31648 | 95167;95168;95169 | chr2:178546389;178546388;178546387 | chr2:179411116;179411115;179411114 |
N2AB | 30007 | 90244;90245;90246 | chr2:178546389;178546388;178546387 | chr2:179411116;179411115;179411114 |
N2A | 29080 | 87463;87464;87465 | chr2:178546389;178546388;178546387 | chr2:179411116;179411115;179411114 |
N2B | 22583 | 67972;67973;67974 | chr2:178546389;178546388;178546387 | chr2:179411116;179411115;179411114 |
Novex-1 | 22708 | 68347;68348;68349 | chr2:178546389;178546388;178546387 | chr2:179411116;179411115;179411114 |
Novex-2 | 22775 | 68548;68549;68550 | chr2:178546389;178546388;178546387 | chr2:179411116;179411115;179411114 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1409620740 | -0.915 | None | N | 0.157 | 0.215 | 0.464528537357 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
I/F | rs1409620740 | -0.915 | None | N | 0.157 | 0.215 | 0.464528537357 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/V | None | None | 0.047 | N | 0.27 | 0.138 | 0.496299407791 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2343 | likely_benign | 0.241 | benign | -1.83 | Destabilizing | 0.228 | N | 0.416 | neutral | None | None | None | None | N |
I/C | 0.4443 | ambiguous | 0.4553 | ambiguous | -0.975 | Destabilizing | 0.94 | D | 0.514 | neutral | None | None | None | None | N |
I/D | 0.6442 | likely_pathogenic | 0.6512 | pathogenic | -1.396 | Destabilizing | 0.816 | D | 0.575 | neutral | None | None | None | None | N |
I/E | 0.5163 | ambiguous | 0.5317 | ambiguous | -1.305 | Destabilizing | 0.816 | D | 0.561 | neutral | None | None | None | None | N |
I/F | 0.097 | likely_benign | 0.1049 | benign | -1.087 | Destabilizing | None | N | 0.157 | neutral | N | 0.436146286 | None | None | N |
I/G | 0.5127 | ambiguous | 0.5288 | ambiguous | -2.227 | Highly Destabilizing | 0.593 | D | 0.535 | neutral | None | None | None | None | N |
I/H | 0.2906 | likely_benign | 0.3128 | benign | -1.36 | Destabilizing | 0.716 | D | 0.519 | neutral | None | None | None | None | N |
I/K | 0.4031 | ambiguous | 0.4055 | ambiguous | -1.256 | Destabilizing | 0.593 | D | 0.562 | neutral | None | None | None | None | N |
I/L | 0.1061 | likely_benign | 0.1075 | benign | -0.765 | Destabilizing | 0.021 | N | 0.277 | neutral | N | 0.48024378 | None | None | N |
I/M | 0.1072 | likely_benign | 0.1077 | benign | -0.616 | Destabilizing | 0.794 | D | 0.459 | neutral | N | 0.454558688 | None | None | N |
I/N | 0.2352 | likely_benign | 0.2365 | benign | -1.207 | Destabilizing | 0.921 | D | 0.56 | neutral | N | 0.463831532 | None | None | N |
I/P | 0.9733 | likely_pathogenic | 0.9698 | pathogenic | -1.092 | Destabilizing | 0.94 | D | 0.532 | neutral | None | None | None | None | N |
I/Q | 0.32 | likely_benign | 0.3401 | ambiguous | -1.274 | Destabilizing | 0.94 | D | 0.531 | neutral | None | None | None | None | N |
I/R | 0.2816 | likely_benign | 0.2897 | benign | -0.749 | Destabilizing | 0.836 | D | 0.561 | neutral | None | None | None | None | N |
I/S | 0.1601 | likely_benign | 0.1656 | benign | -1.854 | Destabilizing | 0.523 | D | 0.533 | neutral | N | 0.39196586 | None | None | N |
I/T | 0.1424 | likely_benign | 0.1409 | benign | -1.638 | Destabilizing | 0.523 | D | 0.481 | neutral | N | 0.348871231 | None | None | N |
I/V | 0.077 | likely_benign | 0.077 | benign | -1.092 | Destabilizing | 0.047 | N | 0.27 | neutral | N | 0.436356929 | None | None | N |
I/W | 0.6338 | likely_pathogenic | 0.6534 | pathogenic | -1.246 | Destabilizing | 0.94 | D | 0.51 | neutral | None | None | None | None | N |
I/Y | 0.3345 | likely_benign | 0.3503 | ambiguous | -0.997 | Destabilizing | 0.001 | N | 0.246 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.