Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31654 | 95185;95186;95187 | chr2:178546371;178546370;178546369 | chr2:179411098;179411097;179411096 |
N2AB | 30013 | 90262;90263;90264 | chr2:178546371;178546370;178546369 | chr2:179411098;179411097;179411096 |
N2A | 29086 | 87481;87482;87483 | chr2:178546371;178546370;178546369 | chr2:179411098;179411097;179411096 |
N2B | 22589 | 67990;67991;67992 | chr2:178546371;178546370;178546369 | chr2:179411098;179411097;179411096 |
Novex-1 | 22714 | 68365;68366;68367 | chr2:178546371;178546370;178546369 | chr2:179411098;179411097;179411096 |
Novex-2 | 22781 | 68566;68567;68568 | chr2:178546371;178546370;178546369 | chr2:179411098;179411097;179411096 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.896 | N | 0.461 | 0.236 | 0.375861065471 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 2.28655E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.968 | N | 0.386 | 0.294 | 0.298056030225 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2417 | likely_benign | 0.2467 | benign | -0.006 | Destabilizing | 0.919 | D | 0.477 | neutral | None | None | None | None | N |
K/C | 0.5289 | ambiguous | 0.5549 | ambiguous | -0.025 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
K/D | 0.448 | ambiguous | 0.4554 | ambiguous | 0.177 | Stabilizing | 0.988 | D | 0.414 | neutral | None | None | None | None | N |
K/E | 0.1283 | likely_benign | 0.1319 | benign | 0.199 | Stabilizing | 0.896 | D | 0.461 | neutral | N | 0.472509731 | None | None | N |
K/F | 0.6918 | likely_pathogenic | 0.7164 | pathogenic | -0.111 | Destabilizing | 0.996 | D | 0.592 | neutral | None | None | None | None | N |
K/G | 0.3573 | ambiguous | 0.3638 | ambiguous | -0.252 | Destabilizing | 0.959 | D | 0.441 | neutral | None | None | None | None | N |
K/H | 0.2288 | likely_benign | 0.247 | benign | -0.638 | Destabilizing | 0.997 | D | 0.485 | neutral | None | None | None | None | N |
K/I | 0.2786 | likely_benign | 0.2861 | benign | 0.572 | Stabilizing | 0.976 | D | 0.594 | neutral | None | None | None | None | N |
K/L | 0.3018 | likely_benign | 0.3143 | benign | 0.572 | Stabilizing | 0.919 | D | 0.453 | neutral | None | None | None | None | N |
K/M | 0.1881 | likely_benign | 0.1896 | benign | 0.45 | Stabilizing | 0.999 | D | 0.486 | neutral | D | 0.536697282 | None | None | N |
K/N | 0.3414 | ambiguous | 0.3478 | ambiguous | 0.332 | Stabilizing | 0.968 | D | 0.386 | neutral | N | 0.507547811 | None | None | N |
K/P | 0.921 | likely_pathogenic | 0.9239 | pathogenic | 0.409 | Stabilizing | 0.996 | D | 0.464 | neutral | None | None | None | None | N |
K/Q | 0.0983 | likely_benign | 0.1032 | benign | 0.151 | Stabilizing | 0.968 | D | 0.427 | neutral | N | 0.469642784 | None | None | N |
K/R | 0.0687 | likely_benign | 0.0712 | benign | -0.046 | Destabilizing | 0.026 | N | 0.273 | neutral | N | 0.474069956 | None | None | N |
K/S | 0.3022 | likely_benign | 0.3192 | benign | -0.202 | Destabilizing | 0.851 | D | 0.431 | neutral | None | None | None | None | N |
K/T | 0.1238 | likely_benign | 0.1251 | benign | -0.017 | Destabilizing | 0.211 | N | 0.307 | neutral | D | 0.524882778 | None | None | N |
K/V | 0.2194 | likely_benign | 0.226 | benign | 0.409 | Stabilizing | 0.976 | D | 0.433 | neutral | None | None | None | None | N |
K/W | 0.6466 | likely_pathogenic | 0.6761 | pathogenic | -0.088 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
K/Y | 0.5565 | ambiguous | 0.5681 | pathogenic | 0.258 | Stabilizing | 0.996 | D | 0.551 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.