Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31657 | 95194;95195;95196 | chr2:178546362;178546361;178546360 | chr2:179411089;179411088;179411087 |
N2AB | 30016 | 90271;90272;90273 | chr2:178546362;178546361;178546360 | chr2:179411089;179411088;179411087 |
N2A | 29089 | 87490;87491;87492 | chr2:178546362;178546361;178546360 | chr2:179411089;179411088;179411087 |
N2B | 22592 | 67999;68000;68001 | chr2:178546362;178546361;178546360 | chr2:179411089;179411088;179411087 |
Novex-1 | 22717 | 68374;68375;68376 | chr2:178546362;178546361;178546360 | chr2:179411089;179411088;179411087 |
Novex-2 | 22784 | 68575;68576;68577 | chr2:178546362;178546361;178546360 | chr2:179411089;179411088;179411087 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs781088841 | -0.024 | 0.006 | N | 0.264 | 0.06 | 0.119812018005 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
D/E | rs781088841 | -0.024 | 0.006 | N | 0.264 | 0.06 | 0.119812018005 | gnomAD-4.0.0 | 3.42103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9948E-07 | 4.63736E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1242 | likely_benign | 0.1293 | benign | -0.024 | Destabilizing | 0.698 | D | 0.53 | neutral | N | 0.483052011 | None | None | N |
D/C | 0.49 | ambiguous | 0.5295 | ambiguous | -0.136 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
D/E | 0.112 | likely_benign | 0.1196 | benign | -0.236 | Destabilizing | 0.006 | N | 0.264 | neutral | N | 0.43691429 | None | None | N |
D/F | 0.4463 | ambiguous | 0.4715 | ambiguous | 0.131 | Stabilizing | 0.993 | D | 0.635 | neutral | None | None | None | None | N |
D/G | 0.1415 | likely_benign | 0.15 | benign | -0.224 | Destabilizing | 0.822 | D | 0.559 | neutral | N | 0.470528218 | None | None | N |
D/H | 0.2236 | likely_benign | 0.2451 | benign | 0.484 | Stabilizing | 0.992 | D | 0.545 | neutral | N | 0.5217064 | None | None | N |
D/I | 0.2069 | likely_benign | 0.2312 | benign | 0.451 | Stabilizing | 0.978 | D | 0.644 | neutral | None | None | None | None | N |
D/K | 0.3044 | likely_benign | 0.3306 | benign | 0.327 | Stabilizing | 0.754 | D | 0.539 | neutral | None | None | None | None | N |
D/L | 0.2241 | likely_benign | 0.2378 | benign | 0.451 | Stabilizing | 0.956 | D | 0.63 | neutral | None | None | None | None | N |
D/M | 0.414 | ambiguous | 0.4556 | ambiguous | 0.294 | Stabilizing | 0.998 | D | 0.63 | neutral | None | None | None | None | N |
D/N | 0.1089 | likely_benign | 0.1167 | benign | -0.042 | Destabilizing | 0.822 | D | 0.523 | neutral | N | 0.452729104 | None | None | N |
D/P | 0.444 | ambiguous | 0.4488 | ambiguous | 0.316 | Stabilizing | 0.978 | D | 0.555 | neutral | None | None | None | None | N |
D/Q | 0.2198 | likely_benign | 0.2393 | benign | 0.025 | Stabilizing | 0.915 | D | 0.491 | neutral | None | None | None | None | N |
D/R | 0.3188 | likely_benign | 0.3426 | ambiguous | 0.6 | Stabilizing | 0.956 | D | 0.582 | neutral | None | None | None | None | N |
D/S | 0.1103 | likely_benign | 0.1168 | benign | -0.143 | Destabilizing | 0.754 | D | 0.525 | neutral | None | None | None | None | N |
D/T | 0.1755 | likely_benign | 0.1927 | benign | 0.021 | Stabilizing | 0.956 | D | 0.513 | neutral | None | None | None | None | N |
D/V | 0.122 | likely_benign | 0.1339 | benign | 0.316 | Stabilizing | 0.942 | D | 0.619 | neutral | N | 0.446189921 | None | None | N |
D/W | 0.8107 | likely_pathogenic | 0.8258 | pathogenic | 0.236 | Stabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
D/Y | 0.1897 | likely_benign | 0.2026 | benign | 0.368 | Stabilizing | 0.99 | D | 0.635 | neutral | N | 0.499330973 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.