Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31660 | 95203;95204;95205 | chr2:178546353;178546352;178546351 | chr2:179411080;179411079;179411078 |
N2AB | 30019 | 90280;90281;90282 | chr2:178546353;178546352;178546351 | chr2:179411080;179411079;179411078 |
N2A | 29092 | 87499;87500;87501 | chr2:178546353;178546352;178546351 | chr2:179411080;179411079;179411078 |
N2B | 22595 | 68008;68009;68010 | chr2:178546353;178546352;178546351 | chr2:179411080;179411079;179411078 |
Novex-1 | 22720 | 68383;68384;68385 | chr2:178546353;178546352;178546351 | chr2:179411080;179411079;179411078 |
Novex-2 | 22787 | 68584;68585;68586 | chr2:178546353;178546352;178546351 | chr2:179411080;179411079;179411078 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.563 | 0.454 | 0.392395365052 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85834E-06 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.589 | 0.381 | 0.316198179892 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3346 | likely_benign | 0.3358 | benign | -0.007 | Destabilizing | 0.999 | D | 0.563 | neutral | N | 0.455112396 | None | None | N |
E/C | 0.9385 | likely_pathogenic | 0.943 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/D | 0.1366 | likely_benign | 0.1466 | benign | -0.343 | Destabilizing | 0.999 | D | 0.457 | neutral | N | 0.424634773 | None | None | N |
E/F | 0.9402 | likely_pathogenic | 0.9458 | pathogenic | -0.081 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/G | 0.2199 | likely_benign | 0.2326 | benign | -0.1 | Destabilizing | 1.0 | D | 0.563 | neutral | N | 0.459131349 | None | None | N |
E/H | 0.6489 | likely_pathogenic | 0.6758 | pathogenic | 0.578 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/I | 0.7619 | likely_pathogenic | 0.7739 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/K | 0.2778 | likely_benign | 0.2908 | benign | 0.31 | Stabilizing | 0.999 | D | 0.589 | neutral | N | 0.462481085 | None | None | N |
E/L | 0.7021 | likely_pathogenic | 0.7177 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
E/M | 0.7719 | likely_pathogenic | 0.7855 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
E/N | 0.4004 | ambiguous | 0.4154 | ambiguous | 0.114 | Stabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
E/P | 0.4674 | ambiguous | 0.4873 | ambiguous | 0.132 | Stabilizing | 1.0 | D | 0.588 | neutral | None | None | None | None | N |
E/Q | 0.2165 | likely_benign | 0.2308 | benign | 0.116 | Stabilizing | 1.0 | D | 0.565 | neutral | N | 0.497383093 | None | None | N |
E/R | 0.409 | ambiguous | 0.433 | ambiguous | 0.546 | Stabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | N |
E/S | 0.2969 | likely_benign | 0.306 | benign | -0.034 | Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
E/T | 0.4765 | ambiguous | 0.4814 | ambiguous | 0.052 | Stabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
E/V | 0.5514 | ambiguous | 0.5674 | pathogenic | 0.132 | Stabilizing | 1.0 | D | 0.599 | neutral | N | 0.474254123 | None | None | N |
E/W | 0.9575 | likely_pathogenic | 0.9646 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/Y | 0.8427 | likely_pathogenic | 0.8551 | pathogenic | 0.131 | Stabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.