Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31661 | 95206;95207;95208 | chr2:178546350;178546349;178546348 | chr2:179411077;179411076;179411075 |
N2AB | 30020 | 90283;90284;90285 | chr2:178546350;178546349;178546348 | chr2:179411077;179411076;179411075 |
N2A | 29093 | 87502;87503;87504 | chr2:178546350;178546349;178546348 | chr2:179411077;179411076;179411075 |
N2B | 22596 | 68011;68012;68013 | chr2:178546350;178546349;178546348 | chr2:179411077;179411076;179411075 |
Novex-1 | 22721 | 68386;68387;68388 | chr2:178546350;178546349;178546348 | chr2:179411077;179411076;179411075 |
Novex-2 | 22788 | 68587;68588;68589 | chr2:178546350;178546349;178546348 | chr2:179411077;179411076;179411075 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1268995899 | 0.295 | 0.999 | N | 0.566 | 0.372 | 0.215869574891 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs1268995899 | 0.295 | 0.999 | N | 0.566 | 0.372 | 0.215869574891 | gnomAD-4.0.0 | 1.36841E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99476E-07 | 1.15934E-05 | 0 |
K/N | None | None | 1.0 | N | 0.657 | 0.253 | 0.137902524267 | gnomAD-4.0.0 | 6.84208E-07 | None | None | None | None | N | None | 0 | 0 | None | 3.82673E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7635 | likely_pathogenic | 0.7898 | pathogenic | -0.372 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | N |
K/C | 0.9329 | likely_pathogenic | 0.9368 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | N |
K/D | 0.7844 | likely_pathogenic | 0.8149 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
K/E | 0.5798 | likely_pathogenic | 0.6063 | pathogenic | 0.079 | Stabilizing | 0.999 | D | 0.566 | neutral | N | 0.506253292 | None | None | N |
K/F | 0.9626 | likely_pathogenic | 0.9679 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/G | 0.7723 | likely_pathogenic | 0.7853 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
K/H | 0.5329 | ambiguous | 0.558 | ambiguous | -1.104 | Destabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
K/I | 0.7953 | likely_pathogenic | 0.824 | pathogenic | 0.534 | Stabilizing | 1.0 | D | 0.622 | neutral | N | 0.515219492 | None | None | N |
K/L | 0.7481 | likely_pathogenic | 0.7811 | pathogenic | 0.534 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
K/M | 0.5733 | likely_pathogenic | 0.6151 | pathogenic | 0.355 | Stabilizing | 1.0 | D | 0.592 | neutral | None | None | None | None | N |
K/N | 0.6502 | likely_pathogenic | 0.6891 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.505733217 | None | None | N |
K/P | 0.9438 | likely_pathogenic | 0.95 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
K/Q | 0.4027 | ambiguous | 0.4272 | ambiguous | -0.335 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.464138812 | None | None | N |
K/R | 0.1166 | likely_benign | 0.118 | benign | -0.579 | Destabilizing | 0.999 | D | 0.546 | neutral | N | 0.387055033 | None | None | N |
K/S | 0.7952 | likely_pathogenic | 0.8149 | pathogenic | -0.877 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
K/T | 0.4718 | ambiguous | 0.512 | ambiguous | -0.579 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.508677522 | None | None | N |
K/V | 0.7458 | likely_pathogenic | 0.7808 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.595 | neutral | None | None | None | None | N |
K/W | 0.9395 | likely_pathogenic | 0.9452 | pathogenic | -0.016 | Destabilizing | 1.0 | D | 0.626 | neutral | None | None | None | None | N |
K/Y | 0.8462 | likely_pathogenic | 0.8524 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.566 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.