Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31669 | 95230;95231;95232 | chr2:178546326;178546325;178546324 | chr2:179411053;179411052;179411051 |
N2AB | 30028 | 90307;90308;90309 | chr2:178546326;178546325;178546324 | chr2:179411053;179411052;179411051 |
N2A | 29101 | 87526;87527;87528 | chr2:178546326;178546325;178546324 | chr2:179411053;179411052;179411051 |
N2B | 22604 | 68035;68036;68037 | chr2:178546326;178546325;178546324 | chr2:179411053;179411052;179411051 |
Novex-1 | 22729 | 68410;68411;68412 | chr2:178546326;178546325;178546324 | chr2:179411053;179411052;179411051 |
Novex-2 | 22796 | 68611;68612;68613 | chr2:178546326;178546325;178546324 | chr2:179411053;179411052;179411051 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.988 | N | 0.525 | 0.334 | 0.304760801415 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4559 | ambiguous | 0.4124 | ambiguous | 0.024 | Stabilizing | 0.759 | D | 0.455 | neutral | None | None | None | None | N |
K/C | 0.7136 | likely_pathogenic | 0.6641 | pathogenic | -0.351 | Destabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
K/D | 0.5845 | likely_pathogenic | 0.5333 | ambiguous | -0.034 | Destabilizing | 0.939 | D | 0.496 | neutral | None | None | None | None | N |
K/E | 0.2728 | likely_benign | 0.2344 | benign | -0.041 | Destabilizing | 0.92 | D | 0.453 | neutral | N | 0.469373425 | None | None | N |
K/F | 0.8357 | likely_pathogenic | 0.7955 | pathogenic | -0.278 | Destabilizing | 0.997 | D | 0.533 | neutral | None | None | None | None | N |
K/G | 0.4396 | ambiguous | 0.3973 | ambiguous | -0.13 | Destabilizing | 0.939 | D | 0.503 | neutral | None | None | None | None | N |
K/H | 0.3567 | ambiguous | 0.3202 | benign | -0.298 | Destabilizing | 0.999 | D | 0.501 | neutral | None | None | None | None | N |
K/I | 0.5362 | ambiguous | 0.4976 | ambiguous | 0.344 | Stabilizing | 0.976 | D | 0.533 | neutral | N | 0.501083199 | None | None | N |
K/L | 0.4381 | ambiguous | 0.4029 | ambiguous | 0.344 | Stabilizing | 0.939 | D | 0.525 | neutral | None | None | None | None | N |
K/M | 0.3211 | likely_benign | 0.2925 | benign | 0.076 | Stabilizing | 0.997 | D | 0.501 | neutral | None | None | None | None | N |
K/N | 0.3984 | ambiguous | 0.3576 | ambiguous | 0.103 | Stabilizing | 0.92 | D | 0.455 | neutral | N | 0.440725386 | None | None | N |
K/P | 0.7123 | likely_pathogenic | 0.6773 | pathogenic | 0.263 | Stabilizing | 0.997 | D | 0.494 | neutral | None | None | None | None | N |
K/Q | 0.149 | likely_benign | 0.1347 | benign | -0.051 | Destabilizing | 0.988 | D | 0.525 | neutral | N | 0.481110571 | None | None | N |
K/R | 0.0867 | likely_benign | 0.0828 | benign | -0.049 | Destabilizing | 0.959 | D | 0.466 | neutral | N | 0.491058206 | None | None | N |
K/S | 0.405 | ambiguous | 0.3574 | ambiguous | -0.335 | Destabilizing | 0.373 | N | 0.224 | neutral | None | None | None | None | N |
K/T | 0.2181 | likely_benign | 0.1929 | benign | -0.209 | Destabilizing | 0.061 | N | 0.24 | neutral | N | 0.388432484 | None | None | N |
K/V | 0.4792 | ambiguous | 0.4385 | ambiguous | 0.263 | Stabilizing | 0.939 | D | 0.52 | neutral | None | None | None | None | N |
K/W | 0.8118 | likely_pathogenic | 0.7648 | pathogenic | -0.34 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
K/Y | 0.6943 | likely_pathogenic | 0.6305 | pathogenic | 0.022 | Stabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.