Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31694 | 95305;95306;95307 | chr2:178546251;178546250;178546249 | chr2:179410978;179410977;179410976 |
N2AB | 30053 | 90382;90383;90384 | chr2:178546251;178546250;178546249 | chr2:179410978;179410977;179410976 |
N2A | 29126 | 87601;87602;87603 | chr2:178546251;178546250;178546249 | chr2:179410978;179410977;179410976 |
N2B | 22629 | 68110;68111;68112 | chr2:178546251;178546250;178546249 | chr2:179410978;179410977;179410976 |
Novex-1 | 22754 | 68485;68486;68487 | chr2:178546251;178546250;178546249 | chr2:179410978;179410977;179410976 |
Novex-2 | 22821 | 68686;68687;68688 | chr2:178546251;178546250;178546249 | chr2:179410978;179410977;179410976 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs776679937 | 0.082 | 1.0 | N | 0.698 | 0.461 | 0.321672782286 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1037 | likely_benign | 0.1003 | benign | -0.288 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | I |
S/C | 0.105 | likely_benign | 0.121 | benign | -0.525 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.516359295 | None | None | I |
S/D | 0.9282 | likely_pathogenic | 0.9381 | pathogenic | -0.344 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
S/E | 0.9423 | likely_pathogenic | 0.9478 | pathogenic | -0.45 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
S/F | 0.4825 | ambiguous | 0.5192 | ambiguous | -1.04 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
S/G | 0.1802 | likely_benign | 0.1771 | benign | -0.28 | Destabilizing | 0.999 | D | 0.58 | neutral | N | 0.500427051 | None | None | I |
S/H | 0.7553 | likely_pathogenic | 0.7996 | pathogenic | -0.506 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/I | 0.4462 | ambiguous | 0.438 | ambiguous | -0.417 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.509681252 | None | None | I |
S/K | 0.9782 | likely_pathogenic | 0.9809 | pathogenic | -0.509 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
S/L | 0.2412 | likely_benign | 0.2562 | benign | -0.417 | Destabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | I |
S/M | 0.3836 | ambiguous | 0.3979 | ambiguous | -0.345 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
S/N | 0.4733 | ambiguous | 0.5472 | ambiguous | -0.28 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.492482358 | None | None | I |
S/P | 0.9338 | likely_pathogenic | 0.9185 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
S/Q | 0.8799 | likely_pathogenic | 0.8927 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
S/R | 0.9497 | likely_pathogenic | 0.9571 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.490429724 | None | None | I |
S/T | 0.2405 | likely_benign | 0.2082 | benign | -0.414 | Destabilizing | 0.999 | D | 0.575 | neutral | N | 0.504947436 | None | None | I |
S/V | 0.3691 | ambiguous | 0.3488 | ambiguous | -0.357 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
S/W | 0.6878 | likely_pathogenic | 0.7271 | pathogenic | -1.135 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
S/Y | 0.497 | ambiguous | 0.5535 | ambiguous | -0.844 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.