Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31698 | 95317;95318;95319 | chr2:178546239;178546238;178546237 | chr2:179410966;179410965;179410964 |
N2AB | 30057 | 90394;90395;90396 | chr2:178546239;178546238;178546237 | chr2:179410966;179410965;179410964 |
N2A | 29130 | 87613;87614;87615 | chr2:178546239;178546238;178546237 | chr2:179410966;179410965;179410964 |
N2B | 22633 | 68122;68123;68124 | chr2:178546239;178546238;178546237 | chr2:179410966;179410965;179410964 |
Novex-1 | 22758 | 68497;68498;68499 | chr2:178546239;178546238;178546237 | chr2:179410966;179410965;179410964 |
Novex-2 | 22825 | 68698;68699;68700 | chr2:178546239;178546238;178546237 | chr2:179410966;179410965;179410964 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.117 | N | 0.556 | 0.124 | 0.353974658523 | gnomAD-4.0.0 | 1.5943E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3288 | likely_benign | 0.3457 | ambiguous | -0.822 | Destabilizing | 0.824 | D | 0.481 | neutral | None | None | None | None | I |
A/D | 0.2153 | likely_benign | 0.2065 | benign | -0.621 | Destabilizing | 0.062 | N | 0.565 | neutral | N | 0.478878343 | None | None | I |
A/E | 0.1715 | likely_benign | 0.1851 | benign | -0.763 | Destabilizing | 0.035 | N | 0.493 | neutral | None | None | None | None | I |
A/F | 0.2741 | likely_benign | 0.2736 | benign | -0.869 | Destabilizing | 0.555 | D | 0.601 | neutral | None | None | None | None | I |
A/G | 0.1419 | likely_benign | 0.1418 | benign | -0.418 | Destabilizing | 0.027 | N | 0.411 | neutral | N | 0.485883821 | None | None | I |
A/H | 0.3258 | likely_benign | 0.3469 | ambiguous | -0.484 | Destabilizing | 0.555 | D | 0.567 | neutral | None | None | None | None | I |
A/I | 0.1622 | likely_benign | 0.164 | benign | -0.334 | Destabilizing | 0.081 | N | 0.559 | neutral | None | None | None | None | I |
A/K | 0.3448 | ambiguous | 0.369 | ambiguous | -0.816 | Destabilizing | 0.081 | N | 0.507 | neutral | None | None | None | None | I |
A/L | 0.1298 | likely_benign | 0.1358 | benign | -0.334 | Destabilizing | 0.035 | N | 0.487 | neutral | None | None | None | None | I |
A/M | 0.1236 | likely_benign | 0.1285 | benign | -0.432 | Destabilizing | 0.555 | D | 0.541 | neutral | None | None | None | None | I |
A/N | 0.1646 | likely_benign | 0.166 | benign | -0.496 | Destabilizing | 0.081 | N | 0.551 | neutral | None | None | None | None | I |
A/P | 0.4228 | ambiguous | 0.4105 | ambiguous | -0.302 | Destabilizing | 0.117 | N | 0.556 | neutral | N | 0.50435279 | None | None | I |
A/Q | 0.2147 | likely_benign | 0.2392 | benign | -0.763 | Destabilizing | 0.002 | N | 0.266 | neutral | None | None | None | None | I |
A/R | 0.3281 | likely_benign | 0.3511 | ambiguous | -0.343 | Destabilizing | 0.081 | N | 0.55 | neutral | None | None | None | None | I |
A/S | 0.0782 | likely_benign | 0.0768 | benign | -0.683 | Destabilizing | None | N | 0.1 | neutral | N | 0.368323783 | None | None | I |
A/T | 0.0652 | likely_benign | 0.0653 | benign | -0.745 | Destabilizing | None | N | 0.087 | neutral | N | 0.390467137 | None | None | I |
A/V | 0.0931 | likely_benign | 0.0919 | benign | -0.302 | Destabilizing | 0.027 | N | 0.425 | neutral | N | 0.472395087 | None | None | I |
A/W | 0.6181 | likely_pathogenic | 0.6151 | pathogenic | -1.036 | Destabilizing | 0.935 | D | 0.617 | neutral | None | None | None | None | I |
A/Y | 0.3532 | ambiguous | 0.3501 | ambiguous | -0.691 | Destabilizing | 0.555 | D | 0.6 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.