Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31705 | 95338;95339;95340 | chr2:178546218;178546217;178546216 | chr2:179410945;179410944;179410943 |
N2AB | 30064 | 90415;90416;90417 | chr2:178546218;178546217;178546216 | chr2:179410945;179410944;179410943 |
N2A | 29137 | 87634;87635;87636 | chr2:178546218;178546217;178546216 | chr2:179410945;179410944;179410943 |
N2B | 22640 | 68143;68144;68145 | chr2:178546218;178546217;178546216 | chr2:179410945;179410944;179410943 |
Novex-1 | 22765 | 68518;68519;68520 | chr2:178546218;178546217;178546216 | chr2:179410945;179410944;179410943 |
Novex-2 | 22832 | 68719;68720;68721 | chr2:178546218;178546217;178546216 | chr2:179410945;179410944;179410943 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.753 | 0.801 | 0.837563285501 | gnomAD-4.0.0 | 1.60676E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89183E-06 | 0 | 0 |
V/L | None | None | 0.997 | D | 0.758 | 0.772 | 0.792235188203 | gnomAD-4.0.0 | 1.60598E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88989E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9647 | likely_pathogenic | 0.9786 | pathogenic | -1.787 | Destabilizing | 0.999 | D | 0.753 | deleterious | D | 0.631055226 | None | None | I |
V/C | 0.989 | likely_pathogenic | 0.9933 | pathogenic | -1.447 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | I |
V/D | 0.9985 | likely_pathogenic | 0.9989 | pathogenic | -2.241 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
V/E | 0.9963 | likely_pathogenic | 0.9972 | pathogenic | -2.218 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | D | 0.615641278 | None | None | I |
V/F | 0.9773 | likely_pathogenic | 0.9864 | pathogenic | -1.414 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
V/G | 0.9722 | likely_pathogenic | 0.979 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.631660639 | None | None | I |
V/H | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -1.627 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
V/I | 0.1422 | likely_benign | 0.189 | benign | -0.948 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | I |
V/K | 0.9975 | likely_pathogenic | 0.998 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
V/L | 0.9366 | likely_pathogenic | 0.9659 | pathogenic | -0.948 | Destabilizing | 0.997 | D | 0.758 | deleterious | D | 0.603499072 | None | None | I |
V/M | 0.9472 | likely_pathogenic | 0.973 | pathogenic | -0.828 | Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.631257031 | None | None | I |
V/N | 0.9926 | likely_pathogenic | 0.9944 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
V/P | 0.9918 | likely_pathogenic | 0.9935 | pathogenic | -1.197 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
V/Q | 0.9971 | likely_pathogenic | 0.998 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
V/R | 0.9952 | likely_pathogenic | 0.9961 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
V/S | 0.9855 | likely_pathogenic | 0.9903 | pathogenic | -1.88 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
V/T | 0.9677 | likely_pathogenic | 0.9746 | pathogenic | -1.754 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | I |
V/W | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
V/Y | 0.9966 | likely_pathogenic | 0.9977 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.