Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31711 | 95356;95357;95358 | chr2:178546105;178546104;178546103 | chr2:179410832;179410831;179410830 |
N2AB | 30070 | 90433;90434;90435 | chr2:178546105;178546104;178546103 | chr2:179410832;179410831;179410830 |
N2A | 29143 | 87652;87653;87654 | chr2:178546105;178546104;178546103 | chr2:179410832;179410831;179410830 |
N2B | 22646 | 68161;68162;68163 | chr2:178546105;178546104;178546103 | chr2:179410832;179410831;179410830 |
Novex-1 | 22771 | 68536;68537;68538 | chr2:178546105;178546104;178546103 | chr2:179410832;179410831;179410830 |
Novex-2 | 22838 | 68737;68738;68739 | chr2:178546105;178546104;178546103 | chr2:179410832;179410831;179410830 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.997 | D | 0.705 | 0.485 | 0.653323239085 | gnomAD-4.0.0 | 6.88534E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0413E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0869 | likely_benign | 0.103 | benign | -1.125 | Destabilizing | 0.543 | D | 0.352 | neutral | N | 0.488174538 | None | None | N |
P/C | 0.4556 | ambiguous | 0.5473 | ambiguous | -0.631 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/D | 0.5395 | ambiguous | 0.6423 | pathogenic | -1.077 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | N |
P/E | 0.3085 | likely_benign | 0.3761 | ambiguous | -1.173 | Destabilizing | 0.983 | D | 0.55 | neutral | None | None | None | None | N |
P/F | 0.4642 | ambiguous | 0.5518 | ambiguous | -1.176 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
P/G | 0.3844 | ambiguous | 0.4605 | ambiguous | -1.33 | Destabilizing | 0.992 | D | 0.577 | neutral | None | None | None | None | N |
P/H | 0.239 | likely_benign | 0.2849 | benign | -0.895 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/I | 0.2483 | likely_benign | 0.3088 | benign | -0.7 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
P/K | 0.2739 | likely_benign | 0.3344 | benign | -0.899 | Destabilizing | 0.983 | D | 0.591 | neutral | None | None | None | None | N |
P/L | 0.1432 | likely_benign | 0.1743 | benign | -0.7 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | D | 0.528314896 | None | None | N |
P/M | 0.3198 | likely_benign | 0.3868 | ambiguous | -0.392 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
P/N | 0.3853 | ambiguous | 0.4884 | ambiguous | -0.505 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
P/Q | 0.1813 | likely_benign | 0.2218 | benign | -0.823 | Destabilizing | 0.889 | D | 0.333 | neutral | N | 0.493271701 | None | None | N |
P/R | 0.181 | likely_benign | 0.2111 | benign | -0.271 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | N | 0.512946119 | None | None | N |
P/S | 0.1606 | likely_benign | 0.2026 | benign | -0.889 | Destabilizing | 0.978 | D | 0.531 | neutral | N | 0.4721028 | None | None | N |
P/T | 0.1374 | likely_benign | 0.1683 | benign | -0.895 | Destabilizing | 0.997 | D | 0.615 | neutral | N | 0.51071762 | None | None | N |
P/V | 0.1717 | likely_benign | 0.2067 | benign | -0.807 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
P/W | 0.7243 | likely_pathogenic | 0.7921 | pathogenic | -1.245 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
P/Y | 0.4663 | ambiguous | 0.5545 | ambiguous | -0.989 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.