Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31721 | 95386;95387;95388 | chr2:178546075;178546074;178546073 | chr2:179410802;179410801;179410800 |
N2AB | 30080 | 90463;90464;90465 | chr2:178546075;178546074;178546073 | chr2:179410802;179410801;179410800 |
N2A | 29153 | 87682;87683;87684 | chr2:178546075;178546074;178546073 | chr2:179410802;179410801;179410800 |
N2B | 22656 | 68191;68192;68193 | chr2:178546075;178546074;178546073 | chr2:179410802;179410801;179410800 |
Novex-1 | 22781 | 68566;68567;68568 | chr2:178546075;178546074;178546073 | chr2:179410802;179410801;179410800 |
Novex-2 | 22848 | 68767;68768;68769 | chr2:178546075;178546074;178546073 | chr2:179410802;179410801;179410800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.755 | 0.527 | 0.515715180578 | gnomAD-4.0.0 | 6.84617E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99956E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3566 | ambiguous | 0.3621 | ambiguous | -0.685 | Destabilizing | 0.999 | D | 0.508 | neutral | N | 0.491251147 | None | None | N |
T/C | 0.7795 | likely_pathogenic | 0.7616 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/D | 0.6889 | likely_pathogenic | 0.6514 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/E | 0.7967 | likely_pathogenic | 0.793 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
T/F | 0.6088 | likely_pathogenic | 0.612 | pathogenic | -0.721 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
T/G | 0.4032 | ambiguous | 0.3837 | ambiguous | -0.95 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/H | 0.5953 | likely_pathogenic | 0.571 | pathogenic | -1.291 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/I | 0.7582 | likely_pathogenic | 0.781 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.519839562 | None | None | N |
T/K | 0.7091 | likely_pathogenic | 0.7245 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.772 | deleterious | N | 0.495441429 | None | None | N |
T/L | 0.3029 | likely_benign | 0.3274 | benign | -0.065 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
T/M | 0.2236 | likely_benign | 0.2609 | benign | 0.278 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/N | 0.2114 | likely_benign | 0.2009 | benign | -0.977 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/P | 0.7978 | likely_pathogenic | 0.7862 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | D | 0.524447917 | None | None | N |
T/Q | 0.5854 | likely_pathogenic | 0.5897 | pathogenic | -1.2 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/R | 0.65 | likely_pathogenic | 0.6577 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.480615631 | None | None | N |
T/S | 0.1436 | likely_benign | 0.1346 | benign | -1.116 | Destabilizing | 0.999 | D | 0.532 | neutral | N | 0.455451617 | None | None | N |
T/V | 0.6271 | likely_pathogenic | 0.6509 | pathogenic | -0.24 | Destabilizing | 0.999 | D | 0.604 | neutral | None | None | None | None | N |
T/W | 0.8914 | likely_pathogenic | 0.8881 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/Y | 0.6676 | likely_pathogenic | 0.6548 | pathogenic | -0.448 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.