Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31723 | 95392;95393;95394 | chr2:178546069;178546068;178546067 | chr2:179410796;179410795;179410794 |
N2AB | 30082 | 90469;90470;90471 | chr2:178546069;178546068;178546067 | chr2:179410796;179410795;179410794 |
N2A | 29155 | 87688;87689;87690 | chr2:178546069;178546068;178546067 | chr2:179410796;179410795;179410794 |
N2B | 22658 | 68197;68198;68199 | chr2:178546069;178546068;178546067 | chr2:179410796;179410795;179410794 |
Novex-1 | 22783 | 68572;68573;68574 | chr2:178546069;178546068;178546067 | chr2:179410796;179410795;179410794 |
Novex-2 | 22850 | 68773;68774;68775 | chr2:178546069;178546068;178546067 | chr2:179410796;179410795;179410794 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1225039103 | -0.021 | 0.999 | N | 0.579 | 0.4 | 0.355450299083 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1225039103 | -0.021 | 0.999 | N | 0.579 | 0.4 | 0.355450299083 | gnomAD-4.0.0 | 1.59239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43349E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6694 | likely_pathogenic | 0.6563 | pathogenic | -0.734 | Destabilizing | 0.999 | D | 0.662 | neutral | N | 0.478521581 | None | None | N |
E/C | 0.9864 | likely_pathogenic | 0.9838 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/D | 0.1895 | likely_benign | 0.1698 | benign | -0.833 | Destabilizing | 0.999 | D | 0.483 | neutral | N | 0.460046574 | None | None | N |
E/F | 0.977 | likely_pathogenic | 0.9748 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/G | 0.5021 | ambiguous | 0.4984 | ambiguous | -1.015 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.469127059 | None | None | N |
E/H | 0.9067 | likely_pathogenic | 0.8931 | pathogenic | -0.766 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | N |
E/I | 0.9061 | likely_pathogenic | 0.9018 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/K | 0.6829 | likely_pathogenic | 0.6814 | pathogenic | -0.254 | Destabilizing | 0.999 | D | 0.579 | neutral | N | 0.473646509 | None | None | N |
E/L | 0.8827 | likely_pathogenic | 0.8781 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/M | 0.8981 | likely_pathogenic | 0.8944 | pathogenic | 0.386 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
E/N | 0.6126 | likely_pathogenic | 0.5874 | pathogenic | -0.56 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/P | 0.9899 | likely_pathogenic | 0.9891 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/Q | 0.4818 | ambiguous | 0.4787 | ambiguous | -0.514 | Destabilizing | 1.0 | D | 0.613 | neutral | N | 0.472596552 | None | None | N |
E/R | 0.8161 | likely_pathogenic | 0.8082 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
E/S | 0.6614 | likely_pathogenic | 0.6499 | pathogenic | -0.806 | Destabilizing | 0.999 | D | 0.628 | neutral | None | None | None | None | N |
E/T | 0.6878 | likely_pathogenic | 0.6572 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/V | 0.7787 | likely_pathogenic | 0.7667 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.495727237 | None | None | N |
E/W | 0.988 | likely_pathogenic | 0.9875 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/Y | 0.939 | likely_pathogenic | 0.9326 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.