Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31724 | 95395;95396;95397 | chr2:178546066;178546065;178546064 | chr2:179410793;179410792;179410791 |
N2AB | 30083 | 90472;90473;90474 | chr2:178546066;178546065;178546064 | chr2:179410793;179410792;179410791 |
N2A | 29156 | 87691;87692;87693 | chr2:178546066;178546065;178546064 | chr2:179410793;179410792;179410791 |
N2B | 22659 | 68200;68201;68202 | chr2:178546066;178546065;178546064 | chr2:179410793;179410792;179410791 |
Novex-1 | 22784 | 68575;68576;68577 | chr2:178546066;178546065;178546064 | chr2:179410793;179410792;179410791 |
Novex-2 | 22851 | 68776;68777;68778 | chr2:178546066;178546065;178546064 | chr2:179410793;179410792;179410791 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1322640877 | -1.035 | 1.0 | N | 0.692 | 0.408 | 0.214338557667 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
K/Q | rs1322640877 | -1.035 | 1.0 | N | 0.692 | 0.408 | 0.214338557667 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86017E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7955 | likely_pathogenic | 0.8265 | pathogenic | -0.568 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
K/C | 0.8863 | likely_pathogenic | 0.8983 | pathogenic | -0.79 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/D | 0.9006 | likely_pathogenic | 0.9148 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
K/E | 0.7083 | likely_pathogenic | 0.7351 | pathogenic | -0.378 | Destabilizing | 0.999 | D | 0.602 | neutral | N | 0.496103374 | None | None | N |
K/F | 0.936 | likely_pathogenic | 0.9518 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
K/G | 0.8331 | likely_pathogenic | 0.8522 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/H | 0.5301 | ambiguous | 0.5658 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
K/I | 0.7673 | likely_pathogenic | 0.7932 | pathogenic | 0.337 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
K/L | 0.7722 | likely_pathogenic | 0.8156 | pathogenic | 0.337 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
K/M | 0.5359 | ambiguous | 0.58 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.757 | deleterious | N | 0.474775826 | None | None | N |
K/N | 0.7404 | likely_pathogenic | 0.7683 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.503877496 | None | None | N |
K/P | 0.9924 | likely_pathogenic | 0.9941 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/Q | 0.3846 | ambiguous | 0.4196 | ambiguous | -0.773 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | N | 0.508475239 | None | None | N |
K/R | 0.1257 | likely_benign | 0.1318 | benign | -0.674 | Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.476498893 | None | None | N |
K/S | 0.7606 | likely_pathogenic | 0.7854 | pathogenic | -1.252 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
K/T | 0.4485 | ambiguous | 0.4562 | ambiguous | -0.958 | Destabilizing | 1.0 | D | 0.784 | deleterious | N | 0.478632334 | None | None | N |
K/V | 0.7426 | likely_pathogenic | 0.7663 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/W | 0.9335 | likely_pathogenic | 0.9499 | pathogenic | -0.259 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
K/Y | 0.7893 | likely_pathogenic | 0.8304 | pathogenic | 0.083 | Stabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.