Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31727 | 95404;95405;95406 | chr2:178546057;178546056;178546055 | chr2:179410784;179410783;179410782 |
N2AB | 30086 | 90481;90482;90483 | chr2:178546057;178546056;178546055 | chr2:179410784;179410783;179410782 |
N2A | 29159 | 87700;87701;87702 | chr2:178546057;178546056;178546055 | chr2:179410784;179410783;179410782 |
N2B | 22662 | 68209;68210;68211 | chr2:178546057;178546056;178546055 | chr2:179410784;179410783;179410782 |
Novex-1 | 22787 | 68584;68585;68586 | chr2:178546057;178546056;178546055 | chr2:179410784;179410783;179410782 |
Novex-2 | 22854 | 68785;68786;68787 | chr2:178546057;178546056;178546055 | chr2:179410784;179410783;179410782 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.994 | D | 0.795 | 0.685 | 0.871487081793 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 1.94099E-04 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8145 | likely_pathogenic | 0.8658 | pathogenic | -2.367 | Highly Destabilizing | 0.97 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/C | 0.8391 | likely_pathogenic | 0.8817 | pathogenic | -1.646 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.803 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
L/E | 0.9952 | likely_pathogenic | 0.9965 | pathogenic | -2.47 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
L/F | 0.5936 | likely_pathogenic | 0.6606 | pathogenic | -1.394 | Destabilizing | 0.989 | D | 0.657 | neutral | D | 0.533987933 | None | None | N |
L/G | 0.984 | likely_pathogenic | 0.9903 | pathogenic | -2.999 | Highly Destabilizing | 0.996 | D | 0.852 | deleterious | None | None | None | None | N |
L/H | 0.9908 | likely_pathogenic | 0.9937 | pathogenic | -2.833 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/I | 0.098 | likely_benign | 0.1064 | benign | -0.481 | Destabilizing | 0.835 | D | 0.605 | neutral | D | 0.528837442 | None | None | N |
L/K | 0.9938 | likely_pathogenic | 0.9946 | pathogenic | -1.64 | Destabilizing | 0.996 | D | 0.786 | deleterious | None | None | None | None | N |
L/M | 0.242 | likely_benign | 0.2852 | benign | -0.724 | Destabilizing | 0.746 | D | 0.368 | neutral | None | None | None | None | N |
L/N | 0.9966 | likely_pathogenic | 0.9976 | pathogenic | -2.318 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
L/P | 0.9926 | likely_pathogenic | 0.995 | pathogenic | -1.098 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/Q | 0.9844 | likely_pathogenic | 0.9886 | pathogenic | -1.918 | Destabilizing | 0.996 | D | 0.847 | deleterious | None | None | None | None | N |
L/R | 0.9857 | likely_pathogenic | 0.9884 | pathogenic | -1.866 | Destabilizing | 0.996 | D | 0.846 | deleterious | None | None | None | None | N |
L/S | 0.9842 | likely_pathogenic | 0.9905 | pathogenic | -2.937 | Highly Destabilizing | 0.994 | D | 0.795 | deleterious | D | 0.556499961 | None | None | N |
L/T | 0.8944 | likely_pathogenic | 0.9261 | pathogenic | -2.424 | Highly Destabilizing | 0.97 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/V | 0.0837 | likely_benign | 0.0944 | benign | -1.098 | Destabilizing | 0.122 | N | 0.289 | neutral | N | 0.510979613 | None | None | N |
L/W | 0.9716 | likely_pathogenic | 0.9803 | pathogenic | -1.791 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/Y | 0.9711 | likely_pathogenic | 0.9769 | pathogenic | -1.503 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.