Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31739 | 95440;95441;95442 | chr2:178546021;178546020;178546019 | chr2:179410748;179410747;179410746 |
N2AB | 30098 | 90517;90518;90519 | chr2:178546021;178546020;178546019 | chr2:179410748;179410747;179410746 |
N2A | 29171 | 87736;87737;87738 | chr2:178546021;178546020;178546019 | chr2:179410748;179410747;179410746 |
N2B | 22674 | 68245;68246;68247 | chr2:178546021;178546020;178546019 | chr2:179410748;179410747;179410746 |
Novex-1 | 22799 | 68620;68621;68622 | chr2:178546021;178546020;178546019 | chr2:179410748;179410747;179410746 |
Novex-2 | 22866 | 68821;68822;68823 | chr2:178546021;178546020;178546019 | chr2:179410748;179410747;179410746 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.024 | N | 0.272 | 0.025 | 0.110078149338 | gnomAD-4.0.0 | 6.84219E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99475E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0833 | likely_benign | 0.0925 | benign | -0.203 | Destabilizing | None | N | 0.132 | neutral | N | 0.466476688 | None | None | I |
E/C | 0.6474 | likely_pathogenic | 0.7225 | pathogenic | -0.032 | Destabilizing | 0.676 | D | 0.453 | neutral | None | None | None | None | I |
E/D | 0.0898 | likely_benign | 0.0912 | benign | -0.201 | Destabilizing | 0.024 | N | 0.272 | neutral | N | 0.457067771 | None | None | I |
E/F | 0.6276 | likely_pathogenic | 0.7119 | pathogenic | -0.135 | Destabilizing | 0.356 | N | 0.485 | neutral | None | None | None | None | I |
E/G | 0.121 | likely_benign | 0.1467 | benign | -0.379 | Destabilizing | 0.012 | N | 0.484 | neutral | N | 0.46707412 | None | None | I |
E/H | 0.2873 | likely_benign | 0.3531 | ambiguous | 0.217 | Stabilizing | 0.001 | N | 0.199 | neutral | None | None | None | None | I |
E/I | 0.2282 | likely_benign | 0.2901 | benign | 0.215 | Stabilizing | 0.001 | N | 0.339 | neutral | None | None | None | None | I |
E/K | 0.0932 | likely_benign | 0.1159 | benign | 0.382 | Stabilizing | 0.012 | N | 0.267 | neutral | N | 0.439290086 | None | None | I |
E/L | 0.2446 | likely_benign | 0.3019 | benign | 0.215 | Stabilizing | 0.016 | N | 0.515 | neutral | None | None | None | None | I |
E/M | 0.2889 | likely_benign | 0.353 | ambiguous | 0.183 | Stabilizing | 0.356 | N | 0.467 | neutral | None | None | None | None | I |
E/N | 0.144 | likely_benign | 0.1705 | benign | 0.14 | Stabilizing | 0.072 | N | 0.275 | neutral | None | None | None | None | I |
E/P | 0.1737 | likely_benign | 0.1846 | benign | 0.096 | Stabilizing | None | N | 0.213 | neutral | None | None | None | None | I |
E/Q | 0.0933 | likely_benign | 0.1082 | benign | 0.173 | Stabilizing | 0.001 | N | 0.177 | neutral | N | 0.512979768 | None | None | I |
E/R | 0.1564 | likely_benign | 0.191 | benign | 0.603 | Stabilizing | 0.038 | N | 0.263 | neutral | None | None | None | None | I |
E/S | 0.1168 | likely_benign | 0.1358 | benign | -0.038 | Destabilizing | 0.003 | N | 0.151 | neutral | None | None | None | None | I |
E/T | 0.1286 | likely_benign | 0.1586 | benign | 0.106 | Stabilizing | 0.001 | N | 0.221 | neutral | None | None | None | None | I |
E/V | 0.1337 | likely_benign | 0.1626 | benign | 0.096 | Stabilizing | 0.012 | N | 0.493 | neutral | N | 0.479334956 | None | None | I |
E/W | 0.7974 | likely_pathogenic | 0.8609 | pathogenic | -0.028 | Destabilizing | 0.864 | D | 0.462 | neutral | None | None | None | None | I |
E/Y | 0.477 | ambiguous | 0.5678 | pathogenic | 0.102 | Stabilizing | 0.214 | N | 0.473 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.