Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31747 | 95464;95465;95466 | chr2:178545997;178545996;178545995 | chr2:179410724;179410723;179410722 |
N2AB | 30106 | 90541;90542;90543 | chr2:178545997;178545996;178545995 | chr2:179410724;179410723;179410722 |
N2A | 29179 | 87760;87761;87762 | chr2:178545997;178545996;178545995 | chr2:179410724;179410723;179410722 |
N2B | 22682 | 68269;68270;68271 | chr2:178545997;178545996;178545995 | chr2:179410724;179410723;179410722 |
Novex-1 | 22807 | 68644;68645;68646 | chr2:178545997;178545996;178545995 | chr2:179410724;179410723;179410722 |
Novex-2 | 22874 | 68845;68846;68847 | chr2:178545997;178545996;178545995 | chr2:179410724;179410723;179410722 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 1.0 | N | 0.885 | 0.446 | 0.627195870872 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9576 | likely_pathogenic | 0.9688 | pathogenic | -2.063 | Highly Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
R/C | 0.5902 | likely_pathogenic | 0.621 | pathogenic | -2.019 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
R/D | 0.9927 | likely_pathogenic | 0.9936 | pathogenic | -1.317 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | I |
R/E | 0.9264 | likely_pathogenic | 0.9371 | pathogenic | -1.064 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
R/F | 0.9562 | likely_pathogenic | 0.9601 | pathogenic | -1.168 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
R/G | 0.9128 | likely_pathogenic | 0.9316 | pathogenic | -2.438 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.473913225 | None | None | I |
R/H | 0.4477 | ambiguous | 0.4704 | ambiguous | -1.739 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
R/I | 0.861 | likely_pathogenic | 0.8821 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.519460237 | None | None | I |
R/K | 0.2236 | likely_benign | 0.2178 | benign | -1.114 | Destabilizing | 0.997 | D | 0.651 | neutral | N | 0.388359834 | None | None | I |
R/L | 0.8078 | likely_pathogenic | 0.8385 | pathogenic | -0.956 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
R/M | 0.8338 | likely_pathogenic | 0.8606 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
R/N | 0.9793 | likely_pathogenic | 0.9814 | pathogenic | -1.67 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
R/P | 0.9974 | likely_pathogenic | 0.9977 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
R/Q | 0.3731 | ambiguous | 0.4197 | ambiguous | -1.493 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
R/S | 0.9723 | likely_pathogenic | 0.9764 | pathogenic | -2.562 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | N | 0.469949979 | None | None | I |
R/T | 0.9272 | likely_pathogenic | 0.9424 | pathogenic | -2.069 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.477178455 | None | None | I |
R/V | 0.9031 | likely_pathogenic | 0.9179 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
R/W | 0.6684 | likely_pathogenic | 0.6834 | pathogenic | -0.614 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
R/Y | 0.8416 | likely_pathogenic | 0.8381 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.