Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31758 | 95497;95498;95499 | chr2:178545964;178545963;178545962 | chr2:179410691;179410690;179410689 |
N2AB | 30117 | 90574;90575;90576 | chr2:178545964;178545963;178545962 | chr2:179410691;179410690;179410689 |
N2A | 29190 | 87793;87794;87795 | chr2:178545964;178545963;178545962 | chr2:179410691;179410690;179410689 |
N2B | 22693 | 68302;68303;68304 | chr2:178545964;178545963;178545962 | chr2:179410691;179410690;179410689 |
Novex-1 | 22818 | 68677;68678;68679 | chr2:178545964;178545963;178545962 | chr2:179410691;179410690;179410689 |
Novex-2 | 22885 | 68878;68879;68880 | chr2:178545964;178545963;178545962 | chr2:179410691;179410690;179410689 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | None | None | 0.999 | D | 0.805 | 0.496 | 0.864996732094 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2049 | likely_benign | 0.205 | benign | -1.433 | Destabilizing | 0.978 | D | 0.477 | neutral | N | 0.481332738 | None | None | I |
V/C | 0.747 | likely_pathogenic | 0.7567 | pathogenic | -1.023 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
V/D | 0.894 | likely_pathogenic | 0.9024 | pathogenic | -1.533 | Destabilizing | 0.999 | D | 0.805 | deleterious | D | 0.536076803 | None | None | I |
V/E | 0.7698 | likely_pathogenic | 0.7855 | pathogenic | -1.416 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | I |
V/F | 0.4028 | ambiguous | 0.4278 | ambiguous | -0.878 | Destabilizing | 0.994 | D | 0.741 | deleterious | N | 0.501612586 | None | None | I |
V/G | 0.5091 | ambiguous | 0.5329 | ambiguous | -1.845 | Destabilizing | 0.997 | D | 0.765 | deleterious | N | 0.518226038 | None | None | I |
V/H | 0.9011 | likely_pathogenic | 0.9073 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
V/I | 0.0935 | likely_benign | 0.0951 | benign | -0.354 | Destabilizing | 0.9 | D | 0.512 | neutral | N | 0.4707729 | None | None | I |
V/K | 0.8708 | likely_pathogenic | 0.8793 | pathogenic | -1.326 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | I |
V/L | 0.2809 | likely_benign | 0.313 | benign | -0.354 | Destabilizing | 0.9 | D | 0.385 | neutral | N | 0.507589804 | None | None | I |
V/M | 0.1808 | likely_benign | 0.1861 | benign | -0.358 | Destabilizing | 0.84 | D | 0.344 | neutral | None | None | None | None | I |
V/N | 0.7596 | likely_pathogenic | 0.7595 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
V/P | 0.9026 | likely_pathogenic | 0.9249 | pathogenic | -0.681 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | I |
V/Q | 0.7233 | likely_pathogenic | 0.741 | pathogenic | -1.428 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
V/R | 0.8266 | likely_pathogenic | 0.8437 | pathogenic | -0.987 | Destabilizing | 0.998 | D | 0.808 | deleterious | None | None | None | None | I |
V/S | 0.4072 | ambiguous | 0.4119 | ambiguous | -1.999 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
V/T | 0.2328 | likely_benign | 0.2239 | benign | -1.75 | Destabilizing | 0.992 | D | 0.539 | neutral | None | None | None | None | I |
V/W | 0.9491 | likely_pathogenic | 0.9596 | pathogenic | -1.241 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
V/Y | 0.8622 | likely_pathogenic | 0.8716 | pathogenic | -0.844 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.