Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31759 | 95500;95501;95502 | chr2:178545961;178545960;178545959 | chr2:179410688;179410687;179410686 |
N2AB | 30118 | 90577;90578;90579 | chr2:178545961;178545960;178545959 | chr2:179410688;179410687;179410686 |
N2A | 29191 | 87796;87797;87798 | chr2:178545961;178545960;178545959 | chr2:179410688;179410687;179410686 |
N2B | 22694 | 68305;68306;68307 | chr2:178545961;178545960;178545959 | chr2:179410688;179410687;179410686 |
Novex-1 | 22819 | 68680;68681;68682 | chr2:178545961;178545960;178545959 | chr2:179410688;179410687;179410686 |
Novex-2 | 22886 | 68881;68882;68883 | chr2:178545961;178545960;178545959 | chr2:179410688;179410687;179410686 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs767475236 | -0.527 | 0.822 | N | 0.585 | 0.407 | 0.329540904979 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/A | rs767475236 | -0.527 | 0.822 | N | 0.585 | 0.407 | 0.329540904979 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1371 | likely_benign | 0.1446 | benign | -0.585 | Destabilizing | 0.822 | D | 0.585 | neutral | N | 0.384647525 | None | None | I |
E/C | 0.784 | likely_pathogenic | 0.7887 | pathogenic | -0.366 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | I |
E/D | 0.1627 | likely_benign | 0.1674 | benign | -0.905 | Destabilizing | 0.006 | N | 0.171 | neutral | N | 0.409273824 | None | None | I |
E/F | 0.8568 | likely_pathogenic | 0.8505 | pathogenic | 0.197 | Stabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | I |
E/G | 0.2307 | likely_benign | 0.2342 | benign | -0.96 | Destabilizing | 0.822 | D | 0.618 | neutral | N | 0.454662184 | None | None | I |
E/H | 0.5001 | ambiguous | 0.5134 | ambiguous | 0.125 | Stabilizing | 0.998 | D | 0.658 | neutral | None | None | None | None | I |
E/I | 0.5838 | likely_pathogenic | 0.564 | pathogenic | 0.437 | Stabilizing | 0.978 | D | 0.784 | deleterious | None | None | None | None | I |
E/K | 0.2615 | likely_benign | 0.2636 | benign | -0.228 | Destabilizing | 0.822 | D | 0.464 | neutral | N | 0.468090054 | None | None | I |
E/L | 0.5621 | ambiguous | 0.5549 | ambiguous | 0.437 | Stabilizing | 0.978 | D | 0.773 | deleterious | None | None | None | None | I |
E/M | 0.5848 | likely_pathogenic | 0.5865 | pathogenic | 0.679 | Stabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | I |
E/N | 0.322 | likely_benign | 0.3151 | benign | -0.946 | Destabilizing | 0.915 | D | 0.628 | neutral | None | None | None | None | I |
E/P | 0.908 | likely_pathogenic | 0.9201 | pathogenic | 0.119 | Stabilizing | 0.978 | D | 0.761 | deleterious | None | None | None | None | I |
E/Q | 0.1756 | likely_benign | 0.1805 | benign | -0.756 | Destabilizing | 0.942 | D | 0.6 | neutral | N | 0.488465326 | None | None | I |
E/R | 0.3888 | ambiguous | 0.4031 | ambiguous | 0.117 | Stabilizing | 0.978 | D | 0.665 | neutral | None | None | None | None | I |
E/S | 0.1925 | likely_benign | 0.1934 | benign | -1.185 | Destabilizing | 0.86 | D | 0.493 | neutral | None | None | None | None | I |
E/T | 0.2541 | likely_benign | 0.2542 | benign | -0.855 | Destabilizing | 0.956 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/V | 0.3126 | likely_benign | 0.311 | benign | 0.119 | Stabilizing | 0.971 | D | 0.738 | prob.delet. | N | 0.439692731 | None | None | I |
E/W | 0.9492 | likely_pathogenic | 0.9542 | pathogenic | 0.503 | Stabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | I |
E/Y | 0.7542 | likely_pathogenic | 0.7462 | pathogenic | 0.481 | Stabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.