Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31767 | 95524;95525;95526 | chr2:178545937;178545936;178545935 | chr2:179410664;179410663;179410662 |
N2AB | 30126 | 90601;90602;90603 | chr2:178545937;178545936;178545935 | chr2:179410664;179410663;179410662 |
N2A | 29199 | 87820;87821;87822 | chr2:178545937;178545936;178545935 | chr2:179410664;179410663;179410662 |
N2B | 22702 | 68329;68330;68331 | chr2:178545937;178545936;178545935 | chr2:179410664;179410663;179410662 |
Novex-1 | 22827 | 68704;68705;68706 | chr2:178545937;178545936;178545935 | chr2:179410664;179410663;179410662 |
Novex-2 | 22894 | 68905;68906;68907 | chr2:178545937;178545936;178545935 | chr2:179410664;179410663;179410662 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1431446089 | -1.294 | None | N | 0.396 | 0.233 | 0.345859378078 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/C | rs1431446089 | -1.294 | None | N | 0.396 | 0.233 | 0.345859378078 | gnomAD-4.0.0 | 4.77354E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57456E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.1804 | likely_benign | 0.1886 | benign | -2.269 | Highly Destabilizing | 0.007 | N | 0.442 | neutral | None | None | None | None | I |
Y/C | 0.0456 | likely_benign | 0.0545 | benign | -1.257 | Destabilizing | None | N | 0.396 | neutral | N | 0.434175055 | None | None | I |
Y/D | 0.4287 | ambiguous | 0.3606 | ambiguous | -1.366 | Destabilizing | 0.055 | N | 0.513 | neutral | N | 0.518269399 | None | None | I |
Y/E | 0.53 | ambiguous | 0.4572 | ambiguous | -1.238 | Destabilizing | 0.038 | N | 0.526 | neutral | None | None | None | None | I |
Y/F | 0.0741 | likely_benign | 0.0779 | benign | -0.781 | Destabilizing | 0.055 | N | 0.385 | neutral | N | 0.423456629 | None | None | I |
Y/G | 0.2336 | likely_benign | 0.2715 | benign | -2.624 | Highly Destabilizing | 0.031 | N | 0.475 | neutral | None | None | None | None | I |
Y/H | 0.0929 | likely_benign | 0.0833 | benign | -1.062 | Destabilizing | None | N | 0.187 | neutral | N | 0.475117601 | None | None | I |
Y/I | 0.2382 | likely_benign | 0.2229 | benign | -1.17 | Destabilizing | 0.072 | N | 0.469 | neutral | None | None | None | None | I |
Y/K | 0.3942 | ambiguous | 0.3775 | ambiguous | -1.592 | Destabilizing | 0.072 | N | 0.529 | neutral | None | None | None | None | I |
Y/L | 0.217 | likely_benign | 0.2109 | benign | -1.17 | Destabilizing | 0.016 | N | 0.427 | neutral | None | None | None | None | I |
Y/M | 0.3171 | likely_benign | 0.322 | benign | -0.948 | Destabilizing | 0.628 | D | 0.509 | neutral | None | None | None | None | I |
Y/N | 0.1697 | likely_benign | 0.1455 | benign | -2.131 | Highly Destabilizing | 0.029 | N | 0.516 | neutral | N | 0.506659604 | None | None | I |
Y/P | 0.9005 | likely_pathogenic | 0.8804 | pathogenic | -1.536 | Destabilizing | 0.136 | N | 0.611 | neutral | None | None | None | None | I |
Y/Q | 0.2834 | likely_benign | 0.2524 | benign | -1.935 | Destabilizing | 0.214 | N | 0.557 | neutral | None | None | None | None | I |
Y/R | 0.2459 | likely_benign | 0.2399 | benign | -1.281 | Destabilizing | 0.072 | N | 0.539 | neutral | None | None | None | None | I |
Y/S | 0.1265 | likely_benign | 0.1276 | benign | -2.591 | Highly Destabilizing | 0.012 | N | 0.431 | neutral | N | 0.521698039 | None | None | I |
Y/T | 0.1761 | likely_benign | 0.1729 | benign | -2.357 | Highly Destabilizing | None | N | 0.409 | neutral | None | None | None | None | I |
Y/V | 0.1594 | likely_benign | 0.1641 | benign | -1.536 | Destabilizing | 0.016 | N | 0.385 | neutral | None | None | None | None | I |
Y/W | 0.2856 | likely_benign | 0.3104 | benign | -0.345 | Destabilizing | 0.628 | D | 0.479 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.