Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31771 | 95536;95537;95538 | chr2:178545925;178545924;178545923 | chr2:179410652;179410651;179410650 |
N2AB | 30130 | 90613;90614;90615 | chr2:178545925;178545924;178545923 | chr2:179410652;179410651;179410650 |
N2A | 29203 | 87832;87833;87834 | chr2:178545925;178545924;178545923 | chr2:179410652;179410651;179410650 |
N2B | 22706 | 68341;68342;68343 | chr2:178545925;178545924;178545923 | chr2:179410652;179410651;179410650 |
Novex-1 | 22831 | 68716;68717;68718 | chr2:178545925;178545924;178545923 | chr2:179410652;179410651;179410650 |
Novex-2 | 22898 | 68917;68918;68919 | chr2:178545925;178545924;178545923 | chr2:179410652;179410651;179410650 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs397517760 | 0.052 | 0.001 | N | 0.212 | 0.084 | 0.124217242631 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | I | None | 1.29132E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/K | rs397517760 | 0.052 | 0.001 | N | 0.212 | 0.084 | 0.124217242631 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/K | rs397517760 | 0.052 | 0.001 | N | 0.212 | 0.084 | 0.124217242631 | gnomAD-4.0.0 | 1.9714E-05 | None | None | None | None | I | None | 7.23729E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5718 | likely_pathogenic | 0.7134 | pathogenic | -0.03 | Destabilizing | 0.404 | N | 0.461 | neutral | None | None | None | None | I |
R/C | 0.3287 | likely_benign | 0.3948 | ambiguous | -0.309 | Destabilizing | 0.991 | D | 0.637 | neutral | None | None | None | None | I |
R/D | 0.7497 | likely_pathogenic | 0.8563 | pathogenic | -0.312 | Destabilizing | 0.826 | D | 0.485 | neutral | None | None | None | None | I |
R/E | 0.5845 | likely_pathogenic | 0.7252 | pathogenic | -0.277 | Destabilizing | 0.404 | N | 0.482 | neutral | None | None | None | None | I |
R/F | 0.8391 | likely_pathogenic | 0.8832 | pathogenic | -0.353 | Destabilizing | 0.967 | D | 0.596 | neutral | None | None | None | None | I |
R/G | 0.2467 | likely_benign | 0.3827 | ambiguous | -0.161 | Destabilizing | 0.505 | D | 0.467 | neutral | N | 0.406361231 | None | None | I |
R/H | 0.138 | likely_benign | 0.1662 | benign | -0.586 | Destabilizing | 0.906 | D | 0.517 | neutral | None | None | None | None | I |
R/I | 0.7345 | likely_pathogenic | 0.8067 | pathogenic | 0.267 | Stabilizing | 0.906 | D | 0.596 | neutral | None | None | None | None | I |
R/K | 0.1118 | likely_benign | 0.1278 | benign | -0.228 | Destabilizing | 0.001 | N | 0.212 | neutral | N | 0.391533425 | None | None | I |
R/L | 0.5204 | ambiguous | 0.62 | pathogenic | 0.267 | Stabilizing | 0.575 | D | 0.467 | neutral | None | None | None | None | I |
R/M | 0.5749 | likely_pathogenic | 0.6824 | pathogenic | -0.12 | Destabilizing | 0.988 | D | 0.509 | neutral | N | 0.486586204 | None | None | I |
R/N | 0.591 | likely_pathogenic | 0.7065 | pathogenic | -0.128 | Destabilizing | 0.826 | D | 0.484 | neutral | None | None | None | None | I |
R/P | 0.8076 | likely_pathogenic | 0.8968 | pathogenic | 0.185 | Stabilizing | 0.906 | D | 0.553 | neutral | None | None | None | None | I |
R/Q | 0.1558 | likely_benign | 0.2012 | benign | -0.182 | Destabilizing | 0.704 | D | 0.517 | neutral | None | None | None | None | I |
R/S | 0.5984 | likely_pathogenic | 0.7175 | pathogenic | -0.331 | Destabilizing | 0.338 | N | 0.477 | neutral | N | 0.481403281 | None | None | I |
R/T | 0.484 | ambiguous | 0.6323 | pathogenic | -0.195 | Destabilizing | 0.505 | D | 0.464 | neutral | N | 0.46797497 | None | None | I |
R/V | 0.7381 | likely_pathogenic | 0.8082 | pathogenic | 0.185 | Stabilizing | 0.826 | D | 0.57 | neutral | None | None | None | None | I |
R/W | 0.3817 | ambiguous | 0.4758 | ambiguous | -0.521 | Destabilizing | 0.988 | D | 0.663 | neutral | N | 0.498360583 | None | None | I |
R/Y | 0.6002 | likely_pathogenic | 0.6758 | pathogenic | -0.125 | Destabilizing | 0.967 | D | 0.555 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.