Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31776 | 95551;95552;95553 | chr2:178545910;178545909;178545908 | chr2:179410637;179410636;179410635 |
N2AB | 30135 | 90628;90629;90630 | chr2:178545910;178545909;178545908 | chr2:179410637;179410636;179410635 |
N2A | 29208 | 87847;87848;87849 | chr2:178545910;178545909;178545908 | chr2:179410637;179410636;179410635 |
N2B | 22711 | 68356;68357;68358 | chr2:178545910;178545909;178545908 | chr2:179410637;179410636;179410635 |
Novex-1 | 22836 | 68731;68732;68733 | chr2:178545910;178545909;178545908 | chr2:179410637;179410636;179410635 |
Novex-2 | 22903 | 68932;68933;68934 | chr2:178545910;178545909;178545908 | chr2:179410637;179410636;179410635 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1696881072 | None | 0.999 | N | 0.517 | 0.397 | 0.163833314356 | gnomAD-4.0.0 | 1.36838E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7431 | likely_pathogenic | 0.7616 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/C | 0.5955 | likely_pathogenic | 0.6293 | pathogenic | -0.075 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
N/D | 0.7423 | likely_pathogenic | 0.7507 | pathogenic | -0.824 | Destabilizing | 0.999 | D | 0.585 | neutral | N | 0.507399484 | None | None | N |
N/E | 0.9248 | likely_pathogenic | 0.935 | pathogenic | -0.697 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
N/F | 0.9609 | likely_pathogenic | 0.9648 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
N/G | 0.7224 | likely_pathogenic | 0.743 | pathogenic | -1.309 | Destabilizing | 0.999 | D | 0.493 | neutral | None | None | None | None | N |
N/H | 0.305 | likely_benign | 0.3609 | ambiguous | -0.987 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.4798272 | None | None | N |
N/I | 0.8538 | likely_pathogenic | 0.8763 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.663 | neutral | N | 0.486826467 | None | None | N |
N/K | 0.8957 | likely_pathogenic | 0.9206 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.46730062 | None | None | N |
N/L | 0.7673 | likely_pathogenic | 0.8276 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
N/M | 0.841 | likely_pathogenic | 0.8647 | pathogenic | 0.432 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
N/P | 0.9822 | likely_pathogenic | 0.9842 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
N/Q | 0.8015 | likely_pathogenic | 0.835 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
N/R | 0.838 | likely_pathogenic | 0.8807 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
N/S | 0.2069 | likely_benign | 0.203 | benign | -1.077 | Destabilizing | 0.999 | D | 0.517 | neutral | N | 0.485462306 | None | None | N |
N/T | 0.5657 | likely_pathogenic | 0.581 | pathogenic | -0.757 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.445263548 | None | None | N |
N/V | 0.803 | likely_pathogenic | 0.8256 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/W | 0.9806 | likely_pathogenic | 0.9842 | pathogenic | -0.324 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
N/Y | 0.6829 | likely_pathogenic | 0.7316 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.651 | neutral | N | 0.507906463 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.