Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31785 | 95578;95579;95580 | chr2:178545883;178545882;178545881 | chr2:179410610;179410609;179410608 |
N2AB | 30144 | 90655;90656;90657 | chr2:178545883;178545882;178545881 | chr2:179410610;179410609;179410608 |
N2A | 29217 | 87874;87875;87876 | chr2:178545883;178545882;178545881 | chr2:179410610;179410609;179410608 |
N2B | 22720 | 68383;68384;68385 | chr2:178545883;178545882;178545881 | chr2:179410610;179410609;179410608 |
Novex-1 | 22845 | 68758;68759;68760 | chr2:178545883;178545882;178545881 | chr2:179410610;179410609;179410608 |
Novex-2 | 22912 | 68959;68960;68961 | chr2:178545883;178545882;178545881 | chr2:179410610;179410609;179410608 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs755742174 | -0.744 | 0.767 | N | 0.322 | 0.187 | 0.53906709209 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/I | rs755742174 | -0.744 | 0.767 | N | 0.322 | 0.187 | 0.53906709209 | gnomAD-4.0.0 | 8.21039E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99473E-06 | 1.15931E-05 | 1.65662E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.379 | ambiguous | 0.3901 | ambiguous | -1.953 | Destabilizing | 0.998 | D | 0.453 | neutral | N | 0.489938155 | None | None | N |
V/C | 0.7938 | likely_pathogenic | 0.7911 | pathogenic | -1.709 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
V/D | 0.9334 | likely_pathogenic | 0.9372 | pathogenic | -2.792 | Highly Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
V/E | 0.6201 | likely_pathogenic | 0.6277 | pathogenic | -2.646 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.473754951 | None | None | N |
V/F | 0.5161 | ambiguous | 0.5032 | ambiguous | -1.226 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/G | 0.6571 | likely_pathogenic | 0.6733 | pathogenic | -2.401 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.533516953 | None | None | N |
V/H | 0.9088 | likely_pathogenic | 0.903 | pathogenic | -2.092 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.1195 | likely_benign | 0.11 | benign | -0.732 | Destabilizing | 0.767 | D | 0.322 | neutral | N | 0.477581118 | None | None | N |
V/K | 0.7585 | likely_pathogenic | 0.7566 | pathogenic | -1.568 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/L | 0.5955 | likely_pathogenic | 0.597 | pathogenic | -0.732 | Destabilizing | 0.981 | D | 0.409 | neutral | N | 0.513585364 | None | None | N |
V/M | 0.2877 | likely_benign | 0.2622 | benign | -0.858 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/N | 0.8175 | likely_pathogenic | 0.8112 | pathogenic | -1.789 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.9948 | likely_pathogenic | 0.9953 | pathogenic | -1.111 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/Q | 0.5552 | ambiguous | 0.5593 | ambiguous | -1.762 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
V/R | 0.6924 | likely_pathogenic | 0.6976 | pathogenic | -1.279 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/S | 0.5454 | ambiguous | 0.5305 | ambiguous | -2.322 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/T | 0.4483 | ambiguous | 0.3919 | ambiguous | -2.057 | Highly Destabilizing | 0.998 | D | 0.583 | neutral | None | None | None | None | N |
V/W | 0.9751 | likely_pathogenic | 0.9744 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
V/Y | 0.8835 | likely_pathogenic | 0.8802 | pathogenic | -1.358 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.