Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31788 | 95587;95588;95589 | chr2:178545874;178545873;178545872 | chr2:179410601;179410600;179410599 |
N2AB | 30147 | 90664;90665;90666 | chr2:178545874;178545873;178545872 | chr2:179410601;179410600;179410599 |
N2A | 29220 | 87883;87884;87885 | chr2:178545874;178545873;178545872 | chr2:179410601;179410600;179410599 |
N2B | 22723 | 68392;68393;68394 | chr2:178545874;178545873;178545872 | chr2:179410601;179410600;179410599 |
Novex-1 | 22848 | 68767;68768;68769 | chr2:178545874;178545873;178545872 | chr2:179410601;179410600;179410599 |
Novex-2 | 22915 | 68968;68969;68970 | chr2:178545874;178545873;178545872 | chr2:179410601;179410600;179410599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs397517761 | None | 1.0 | N | 0.756 | 0.42 | 0.425028116352 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/H | rs1696861248 | None | 0.999 | N | 0.625 | 0.457 | 0.331365685468 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs1696861248 | None | 0.999 | N | 0.625 | 0.457 | 0.331365685468 | gnomAD-4.0.0 | 1.31428E-05 | None | None | None | None | I | None | 2.41231E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47003E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9279 | likely_pathogenic | 0.9384 | pathogenic | -0.665 | Destabilizing | 0.996 | D | 0.643 | neutral | None | None | None | None | I |
Y/C | 0.6137 | likely_pathogenic | 0.6373 | pathogenic | 0.06 | Stabilizing | 1.0 | D | 0.756 | deleterious | N | 0.468557628 | None | None | I |
Y/D | 0.9211 | likely_pathogenic | 0.9198 | pathogenic | 1.0 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | N | 0.494331204 | None | None | I |
Y/E | 0.9781 | likely_pathogenic | 0.9752 | pathogenic | 0.984 | Stabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
Y/F | 0.1123 | likely_benign | 0.1215 | benign | -0.345 | Destabilizing | 0.217 | N | 0.293 | neutral | N | 0.45433411 | None | None | I |
Y/G | 0.9348 | likely_pathogenic | 0.9354 | pathogenic | -0.851 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
Y/H | 0.6351 | likely_pathogenic | 0.5957 | pathogenic | 0.193 | Stabilizing | 0.999 | D | 0.625 | neutral | N | 0.465644339 | None | None | I |
Y/I | 0.8173 | likely_pathogenic | 0.8315 | pathogenic | -0.2 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | I |
Y/K | 0.9815 | likely_pathogenic | 0.9777 | pathogenic | 0.228 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
Y/L | 0.8379 | likely_pathogenic | 0.8427 | pathogenic | -0.2 | Destabilizing | 0.983 | D | 0.644 | neutral | None | None | None | None | I |
Y/M | 0.8861 | likely_pathogenic | 0.8862 | pathogenic | -0.07 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | I |
Y/N | 0.6888 | likely_pathogenic | 0.6917 | pathogenic | 0.048 | Stabilizing | 0.999 | D | 0.727 | prob.delet. | N | 0.473517924 | None | None | I |
Y/P | 0.9939 | likely_pathogenic | 0.9924 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | I |
Y/Q | 0.9584 | likely_pathogenic | 0.9497 | pathogenic | 0.096 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
Y/R | 0.9594 | likely_pathogenic | 0.9496 | pathogenic | 0.47 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
Y/S | 0.8534 | likely_pathogenic | 0.8717 | pathogenic | -0.418 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.503568064 | None | None | I |
Y/T | 0.9387 | likely_pathogenic | 0.9443 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
Y/V | 0.7571 | likely_pathogenic | 0.789 | pathogenic | -0.335 | Destabilizing | 0.992 | D | 0.68 | prob.neutral | None | None | None | None | I |
Y/W | 0.6385 | likely_pathogenic | 0.6165 | pathogenic | -0.465 | Destabilizing | 1.0 | D | 0.622 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.