Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31795 | 95608;95609;95610 | chr2:178545853;178545852;178545851 | chr2:179410580;179410579;179410578 |
N2AB | 30154 | 90685;90686;90687 | chr2:178545853;178545852;178545851 | chr2:179410580;179410579;179410578 |
N2A | 29227 | 87904;87905;87906 | chr2:178545853;178545852;178545851 | chr2:179410580;179410579;179410578 |
N2B | 22730 | 68413;68414;68415 | chr2:178545853;178545852;178545851 | chr2:179410580;179410579;179410578 |
Novex-1 | 22855 | 68788;68789;68790 | chr2:178545853;178545852;178545851 | chr2:179410580;179410579;179410578 |
Novex-2 | 22922 | 68989;68990;68991 | chr2:178545853;178545852;178545851 | chr2:179410580;179410579;179410578 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.999 | N | 0.798 | 0.164 | 0.240491677333 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/V | rs1441773765 | 0.449 | 0.999 | N | 0.769 | 0.508 | 0.590258251349 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs1441773765 | 0.449 | 0.999 | N | 0.769 | 0.508 | 0.590258251349 | gnomAD-4.0.0 | 1.59138E-06 | None | None | None | None | N | None | 0 | 2.28645E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2045 | likely_benign | 0.2366 | benign | -0.695 | Destabilizing | 0.997 | D | 0.816 | deleterious | N | 0.480786079 | None | None | N |
E/C | 0.84 | likely_pathogenic | 0.8608 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/D | 0.201 | likely_benign | 0.2084 | benign | -0.833 | Destabilizing | 0.997 | D | 0.771 | deleterious | N | 0.513571627 | None | None | N |
E/F | 0.7446 | likely_pathogenic | 0.769 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/G | 0.3829 | ambiguous | 0.4271 | ambiguous | -1.079 | Destabilizing | 0.999 | D | 0.742 | deleterious | N | 0.489268776 | None | None | N |
E/H | 0.6421 | likely_pathogenic | 0.6682 | pathogenic | 0.135 | Stabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/I | 0.2877 | likely_benign | 0.3202 | benign | 0.359 | Stabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
E/K | 0.3658 | ambiguous | 0.3958 | ambiguous | -0.187 | Destabilizing | 0.997 | D | 0.84 | deleterious | N | 0.484331251 | None | None | N |
E/L | 0.371 | ambiguous | 0.402 | ambiguous | 0.359 | Stabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
E/M | 0.4201 | ambiguous | 0.4646 | ambiguous | 0.645 | Stabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
E/N | 0.3825 | ambiguous | 0.4064 | ambiguous | -0.913 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
E/P | 0.7043 | likely_pathogenic | 0.7395 | pathogenic | 0.029 | Stabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
E/Q | 0.1906 | likely_benign | 0.2043 | benign | -0.747 | Destabilizing | 0.999 | D | 0.798 | deleterious | N | 0.517209365 | None | None | N |
E/R | 0.5393 | ambiguous | 0.5708 | pathogenic | 0.182 | Stabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
E/S | 0.2718 | likely_benign | 0.307 | benign | -1.203 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
E/T | 0.2275 | likely_benign | 0.2646 | benign | -0.864 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
E/V | 0.178 | likely_benign | 0.2044 | benign | 0.029 | Stabilizing | 0.999 | D | 0.769 | deleterious | N | 0.476800061 | None | None | N |
E/W | 0.9412 | likely_pathogenic | 0.9506 | pathogenic | 0.543 | Stabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/Y | 0.6989 | likely_pathogenic | 0.7314 | pathogenic | 0.491 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.