Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31798 | 95617;95618;95619 | chr2:178545844;178545843;178545842 | chr2:179410571;179410570;179410569 |
N2AB | 30157 | 90694;90695;90696 | chr2:178545844;178545843;178545842 | chr2:179410571;179410570;179410569 |
N2A | 29230 | 87913;87914;87915 | chr2:178545844;178545843;178545842 | chr2:179410571;179410570;179410569 |
N2B | 22733 | 68422;68423;68424 | chr2:178545844;178545843;178545842 | chr2:179410571;179410570;179410569 |
Novex-1 | 22858 | 68797;68798;68799 | chr2:178545844;178545843;178545842 | chr2:179410571;179410570;179410569 |
Novex-2 | 22925 | 68998;68999;69000 | chr2:178545844;178545843;178545842 | chr2:179410571;179410570;179410569 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.002 | N | 0.308 | 0.159 | 0.128392430309 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0622 | likely_benign | 0.066 | benign | -0.758 | Destabilizing | 0.002 | N | 0.308 | neutral | N | 0.498520109 | None | None | N |
P/C | 0.4089 | ambiguous | 0.4484 | ambiguous | -0.67 | Destabilizing | 0.992 | D | 0.822 | deleterious | None | None | None | None | N |
P/D | 0.5465 | ambiguous | 0.593 | pathogenic | -0.669 | Destabilizing | 0.848 | D | 0.617 | neutral | None | None | None | None | N |
P/E | 0.3244 | likely_benign | 0.3576 | ambiguous | -0.743 | Destabilizing | 0.615 | D | 0.593 | neutral | None | None | None | None | N |
P/F | 0.5829 | likely_pathogenic | 0.6063 | pathogenic | -0.728 | Destabilizing | 0.919 | D | 0.824 | deleterious | None | None | None | None | N |
P/G | 0.2722 | likely_benign | 0.3049 | benign | -0.959 | Destabilizing | 0.444 | N | 0.645 | neutral | None | None | None | None | N |
P/H | 0.3012 | likely_benign | 0.3131 | benign | -0.456 | Destabilizing | 0.977 | D | 0.775 | deleterious | None | None | None | None | N |
P/I | 0.3123 | likely_benign | 0.3371 | benign | -0.353 | Destabilizing | 0.848 | D | 0.774 | deleterious | None | None | None | None | N |
P/K | 0.3757 | ambiguous | 0.4063 | ambiguous | -0.77 | Destabilizing | 0.444 | N | 0.601 | neutral | None | None | None | None | N |
P/L | 0.1862 | likely_benign | 0.2005 | benign | -0.353 | Destabilizing | 0.376 | N | 0.715 | prob.delet. | N | 0.507822736 | None | None | N |
P/M | 0.3154 | likely_benign | 0.3447 | ambiguous | -0.397 | Destabilizing | 0.992 | D | 0.777 | deleterious | None | None | None | None | N |
P/N | 0.3458 | ambiguous | 0.3782 | ambiguous | -0.522 | Destabilizing | 0.737 | D | 0.676 | prob.neutral | None | None | None | None | N |
P/Q | 0.2204 | likely_benign | 0.2382 | benign | -0.742 | Destabilizing | 0.808 | D | 0.677 | prob.neutral | D | 0.526812364 | None | None | N |
P/R | 0.2915 | likely_benign | 0.3104 | benign | -0.205 | Destabilizing | 0.808 | D | 0.732 | deleterious | N | 0.518672063 | None | None | N |
P/S | 0.1348 | likely_benign | 0.1446 | benign | -0.898 | Destabilizing | 0.016 | N | 0.352 | neutral | N | 0.485778007 | None | None | N |
P/T | 0.1175 | likely_benign | 0.131 | benign | -0.87 | Destabilizing | 0.016 | N | 0.352 | neutral | N | 0.5031747 | None | None | N |
P/V | 0.1981 | likely_benign | 0.2182 | benign | -0.452 | Destabilizing | 0.444 | N | 0.653 | prob.neutral | None | None | None | None | N |
P/W | 0.7444 | likely_pathogenic | 0.7649 | pathogenic | -0.848 | Destabilizing | 0.992 | D | 0.775 | deleterious | None | None | None | None | N |
P/Y | 0.5383 | ambiguous | 0.5534 | ambiguous | -0.562 | Destabilizing | 0.972 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.