Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31803 | 95632;95633;95634 | chr2:178545829;178545828;178545827 | chr2:179410556;179410555;179410554 |
N2AB | 30162 | 90709;90710;90711 | chr2:178545829;178545828;178545827 | chr2:179410556;179410555;179410554 |
N2A | 29235 | 87928;87929;87930 | chr2:178545829;178545828;178545827 | chr2:179410556;179410555;179410554 |
N2B | 22738 | 68437;68438;68439 | chr2:178545829;178545828;178545827 | chr2:179410556;179410555;179410554 |
Novex-1 | 22863 | 68812;68813;68814 | chr2:178545829;178545828;178545827 | chr2:179410556;179410555;179410554 |
Novex-2 | 22930 | 69013;69014;69015 | chr2:178545829;178545828;178545827 | chr2:179410556;179410555;179410554 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | rs2154145420 | None | 0.997 | N | 0.711 | 0.336 | 0.349429436713 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.693 | likely_pathogenic | 0.6798 | pathogenic | -0.239 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
N/C | 0.7132 | likely_pathogenic | 0.686 | pathogenic | 0.351 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
N/D | 0.1709 | likely_benign | 0.1754 | benign | 0.086 | Stabilizing | 0.997 | D | 0.631 | neutral | N | 0.453958468 | None | None | N |
N/E | 0.7937 | likely_pathogenic | 0.792 | pathogenic | 0.031 | Stabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/F | 0.8741 | likely_pathogenic | 0.8647 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.729 | deleterious | None | None | None | None | N |
N/G | 0.7332 | likely_pathogenic | 0.7113 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | N |
N/H | 0.3681 | ambiguous | 0.3398 | benign | -0.431 | Destabilizing | 0.999 | D | 0.777 | deleterious | N | 0.455363978 | None | None | N |
N/I | 0.5831 | likely_pathogenic | 0.5786 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.741 | deleterious | N | 0.481409915 | None | None | N |
N/K | 0.8808 | likely_pathogenic | 0.8814 | pathogenic | 0.144 | Stabilizing | 0.999 | D | 0.729 | deleterious | N | 0.507483522 | None | None | N |
N/L | 0.5999 | likely_pathogenic | 0.586 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.668 | prob.neutral | None | None | None | None | N |
N/M | 0.7066 | likely_pathogenic | 0.6975 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
N/P | 0.7785 | likely_pathogenic | 0.7879 | pathogenic | -0.036 | Destabilizing | 0.999 | D | 0.721 | deleterious | None | None | None | None | N |
N/Q | 0.7992 | likely_pathogenic | 0.7925 | pathogenic | -0.278 | Destabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
N/R | 0.8981 | likely_pathogenic | 0.8955 | pathogenic | 0.213 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
N/S | 0.2065 | likely_benign | 0.202 | benign | -0.02 | Destabilizing | 0.997 | D | 0.529 | neutral | N | 0.488455044 | None | None | N |
N/T | 0.4565 | ambiguous | 0.439 | ambiguous | 0.054 | Stabilizing | 0.997 | D | 0.711 | prob.delet. | N | 0.456457269 | None | None | N |
N/V | 0.6227 | likely_pathogenic | 0.6134 | pathogenic | -0.036 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/W | 0.9575 | likely_pathogenic | 0.9545 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.727 | deleterious | None | None | None | None | N |
N/Y | 0.4694 | ambiguous | 0.456 | ambiguous | -0.45 | Destabilizing | 1.0 | D | 0.75 | deleterious | N | 0.480665067 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.