Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31810 | 95653;95654;95655 | chr2:178545682;178545681;178545680 | chr2:179410409;179410408;179410407 |
N2AB | 30169 | 90730;90731;90732 | chr2:178545682;178545681;178545680 | chr2:179410409;179410408;179410407 |
N2A | 29242 | 87949;87950;87951 | chr2:178545682;178545681;178545680 | chr2:179410409;179410408;179410407 |
N2B | 22745 | 68458;68459;68460 | chr2:178545682;178545681;178545680 | chr2:179410409;179410408;179410407 |
Novex-1 | 22870 | 68833;68834;68835 | chr2:178545682;178545681;178545680 | chr2:179410409;179410408;179410407 |
Novex-2 | 22937 | 69034;69035;69036 | chr2:178545682;178545681;178545680 | chr2:179410409;179410408;179410407 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.117 | N | 0.668 | 0.349 | 0.326074293725 | gnomAD-4.0.0 | 1.59393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43377E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0526 | likely_benign | 0.0541 | benign | -1.26 | Destabilizing | 0.001 | N | 0.383 | neutral | N | 0.445114407 | None | None | N |
P/C | 0.2646 | likely_benign | 0.2692 | benign | -1.16 | Destabilizing | 0.935 | D | 0.808 | deleterious | None | None | None | None | N |
P/D | 0.5954 | likely_pathogenic | 0.5616 | ambiguous | -1.804 | Destabilizing | 0.149 | N | 0.67 | neutral | None | None | None | None | N |
P/E | 0.2017 | likely_benign | 0.1842 | benign | -1.864 | Destabilizing | 0.035 | N | 0.545 | neutral | None | None | None | None | N |
P/F | 0.4249 | ambiguous | 0.4268 | ambiguous | -1.406 | Destabilizing | 0.791 | D | 0.807 | deleterious | None | None | None | None | N |
P/G | 0.2737 | likely_benign | 0.2584 | benign | -1.474 | Destabilizing | 0.067 | N | 0.659 | neutral | None | None | None | None | N |
P/H | 0.1703 | likely_benign | 0.1618 | benign | -0.966 | Destabilizing | 0.38 | N | 0.794 | deleterious | None | None | None | None | N |
P/I | 0.2464 | likely_benign | 0.246 | benign | -0.793 | Destabilizing | 0.555 | D | 0.792 | deleterious | None | None | None | None | N |
P/K | 0.1475 | likely_benign | 0.1372 | benign | -0.94 | Destabilizing | 0.035 | N | 0.625 | neutral | None | None | None | None | N |
P/L | 0.123 | likely_benign | 0.1148 | benign | -0.793 | Destabilizing | 0.117 | N | 0.721 | prob.delet. | N | 0.521343591 | None | None | N |
P/M | 0.2278 | likely_benign | 0.2203 | benign | -0.594 | Destabilizing | 0.555 | D | 0.798 | deleterious | None | None | None | None | N |
P/N | 0.3721 | ambiguous | 0.3512 | ambiguous | -0.841 | Destabilizing | 0.149 | N | 0.75 | deleterious | None | None | None | None | N |
P/Q | 0.0719 | likely_benign | 0.0656 | benign | -1.181 | Destabilizing | None | N | 0.392 | neutral | N | 0.490108604 | None | None | N |
P/R | 0.1056 | likely_benign | 0.099 | benign | -0.358 | Destabilizing | 0.062 | N | 0.736 | prob.delet. | N | 0.501971888 | None | None | N |
P/S | 0.1029 | likely_benign | 0.1006 | benign | -1.222 | Destabilizing | 0.027 | N | 0.613 | neutral | N | 0.477182136 | None | None | N |
P/T | 0.1179 | likely_benign | 0.1144 | benign | -1.191 | Destabilizing | 0.117 | N | 0.668 | neutral | N | 0.509480307 | None | None | N |
P/V | 0.1619 | likely_benign | 0.1614 | benign | -0.917 | Destabilizing | 0.149 | N | 0.719 | prob.delet. | None | None | None | None | N |
P/W | 0.5747 | likely_pathogenic | 0.5572 | ambiguous | -1.5 | Destabilizing | 0.935 | D | 0.809 | deleterious | None | None | None | None | N |
P/Y | 0.3976 | ambiguous | 0.3836 | ambiguous | -1.164 | Destabilizing | 0.555 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.