Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31815 | 95668;95669;95670 | chr2:178545667;178545666;178545665 | chr2:179410394;179410393;179410392 |
N2AB | 30174 | 90745;90746;90747 | chr2:178545667;178545666;178545665 | chr2:179410394;179410393;179410392 |
N2A | 29247 | 87964;87965;87966 | chr2:178545667;178545666;178545665 | chr2:179410394;179410393;179410392 |
N2B | 22750 | 68473;68474;68475 | chr2:178545667;178545666;178545665 | chr2:179410394;179410393;179410392 |
Novex-1 | 22875 | 68848;68849;68850 | chr2:178545667;178545666;178545665 | chr2:179410394;179410393;179410392 |
Novex-2 | 22942 | 69049;69050;69051 | chr2:178545667;178545666;178545665 | chr2:179410394;179410393;179410392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs779953291 | -0.442 | 0.37 | N | 0.48 | 0.225 | 0.297375071883 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/K | rs779953291 | -0.442 | 0.37 | N | 0.48 | 0.225 | 0.297375071883 | gnomAD-4.0.0 | 2.05303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7993E-06 | 1.15969E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1595 | likely_benign | 0.1639 | benign | -0.541 | Destabilizing | 0.978 | D | 0.559 | neutral | N | 0.480825759 | None | None | N |
E/C | 0.7211 | likely_pathogenic | 0.7622 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/D | 0.1803 | likely_benign | 0.2053 | benign | -0.627 | Destabilizing | 0.121 | N | 0.434 | neutral | N | 0.491118881 | None | None | N |
E/F | 0.6845 | likely_pathogenic | 0.7179 | pathogenic | -0.21 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/G | 0.2199 | likely_benign | 0.2213 | benign | -0.801 | Destabilizing | 0.978 | D | 0.634 | neutral | N | 0.480269555 | None | None | N |
E/H | 0.385 | ambiguous | 0.4031 | ambiguous | -0.148 | Destabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | N |
E/I | 0.2457 | likely_benign | 0.2835 | benign | 0.134 | Stabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
E/K | 0.1191 | likely_benign | 0.1144 | benign | -0.055 | Destabilizing | 0.37 | N | 0.48 | neutral | N | 0.507645733 | None | None | N |
E/L | 0.3044 | likely_benign | 0.3188 | benign | 0.134 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/M | 0.3329 | likely_benign | 0.3541 | ambiguous | 0.248 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/N | 0.2556 | likely_benign | 0.2943 | benign | -0.454 | Destabilizing | 0.995 | D | 0.513 | neutral | None | None | None | None | N |
E/P | 0.9406 | likely_pathogenic | 0.9331 | pathogenic | -0.07 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/Q | 0.1109 | likely_benign | 0.1098 | benign | -0.386 | Destabilizing | 0.994 | D | 0.499 | neutral | N | 0.502490629 | None | None | N |
E/R | 0.2029 | likely_benign | 0.1976 | benign | 0.229 | Stabilizing | 0.99 | D | 0.501 | neutral | None | None | None | None | N |
E/S | 0.1901 | likely_benign | 0.2056 | benign | -0.638 | Destabilizing | 0.983 | D | 0.433 | neutral | None | None | None | None | N |
E/T | 0.1598 | likely_benign | 0.1778 | benign | -0.428 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
E/V | 0.1455 | likely_benign | 0.1589 | benign | -0.07 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | N | 0.508379238 | None | None | N |
E/W | 0.8629 | likely_pathogenic | 0.8734 | pathogenic | -0.003 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/Y | 0.587 | likely_pathogenic | 0.6129 | pathogenic | 0.033 | Stabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.