Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31816 | 95671;95672;95673 | chr2:178545664;178545663;178545662 | chr2:179410391;179410390;179410389 |
N2AB | 30175 | 90748;90749;90750 | chr2:178545664;178545663;178545662 | chr2:179410391;179410390;179410389 |
N2A | 29248 | 87967;87968;87969 | chr2:178545664;178545663;178545662 | chr2:179410391;179410390;179410389 |
N2B | 22751 | 68476;68477;68478 | chr2:178545664;178545663;178545662 | chr2:179410391;179410390;179410389 |
Novex-1 | 22876 | 68851;68852;68853 | chr2:178545664;178545663;178545662 | chr2:179410391;179410390;179410389 |
Novex-2 | 22943 | 69052;69053;69054 | chr2:178545664;178545663;178545662 | chr2:179410391;179410390;179410389 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.001 | N | 0.241 | 0.068 | 0.192905019026 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
E/V | rs1226499081 | 0.243 | 0.101 | N | 0.483 | 0.212 | 0.159798565429 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65893E-04 |
E/V | rs1226499081 | 0.243 | 0.101 | N | 0.483 | 0.212 | 0.159798565429 | gnomAD-4.0.0 | 1.59188E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0248E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.065 | likely_benign | 0.0583 | benign | -0.438 | Destabilizing | None | N | 0.345 | neutral | N | 0.324766928 | None | None | N |
E/C | 0.6286 | likely_pathogenic | 0.5997 | pathogenic | -0.287 | Destabilizing | 0.94 | D | 0.639 | neutral | None | None | None | None | N |
E/D | 0.2214 | likely_benign | 0.2177 | benign | -0.574 | Destabilizing | 0.183 | N | 0.404 | neutral | N | 0.422915125 | None | None | N |
E/F | 0.6721 | likely_pathogenic | 0.6425 | pathogenic | 0.095 | Stabilizing | 0.836 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/G | 0.1569 | likely_benign | 0.144 | benign | -0.731 | Destabilizing | 0.001 | N | 0.476 | neutral | N | 0.433265404 | None | None | N |
E/H | 0.5223 | ambiguous | 0.4918 | ambiguous | 0.215 | Stabilizing | 0.836 | D | 0.477 | neutral | None | None | None | None | N |
E/I | 0.1665 | likely_benign | 0.1635 | benign | 0.333 | Stabilizing | 0.01 | N | 0.564 | neutral | None | None | None | None | N |
E/K | 0.1769 | likely_benign | 0.1652 | benign | 0.088 | Stabilizing | 0.001 | N | 0.241 | neutral | N | 0.433785479 | None | None | N |
E/L | 0.3079 | likely_benign | 0.2961 | benign | 0.333 | Stabilizing | 0.129 | N | 0.499 | neutral | None | None | None | None | N |
E/M | 0.2656 | likely_benign | 0.2487 | benign | 0.367 | Stabilizing | 0.836 | D | 0.618 | neutral | None | None | None | None | N |
E/N | 0.2765 | likely_benign | 0.2674 | benign | -0.499 | Destabilizing | 0.228 | N | 0.429 | neutral | None | None | None | None | N |
E/P | 0.2916 | likely_benign | 0.2567 | benign | 0.098 | Stabilizing | 0.593 | D | 0.547 | neutral | None | None | None | None | N |
E/Q | 0.157 | likely_benign | 0.1473 | benign | -0.377 | Destabilizing | 0.213 | N | 0.495 | neutral | N | 0.470879643 | None | None | N |
E/R | 0.3243 | likely_benign | 0.3093 | benign | 0.418 | Stabilizing | 0.264 | N | 0.435 | neutral | None | None | None | None | N |
E/S | 0.1771 | likely_benign | 0.1705 | benign | -0.674 | Destabilizing | 0.004 | N | 0.208 | neutral | None | None | None | None | N |
E/T | 0.1547 | likely_benign | 0.1431 | benign | -0.422 | Destabilizing | 0.004 | N | 0.349 | neutral | None | None | None | None | N |
E/V | 0.1023 | likely_benign | 0.0991 | benign | 0.098 | Stabilizing | 0.101 | N | 0.483 | neutral | N | 0.26035009 | None | None | N |
E/W | 0.9069 | likely_pathogenic | 0.8817 | pathogenic | 0.348 | Stabilizing | 0.983 | D | 0.656 | neutral | None | None | None | None | N |
E/Y | 0.5566 | ambiguous | 0.5195 | ambiguous | 0.363 | Stabilizing | 0.94 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.